Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trnp1Q80ZI1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trnp1Q80ZI1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trnp1Q80ZI1 Gm45058-201ENSMUST00000205810 766 ntBASIC20.89■□□□□ 0.93
Trnp1Q80ZI1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trnp1Q80ZI1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trnp1Q80ZI1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trnp1Q80ZI1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Trnp1Q80ZI1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trnp1Q80ZI1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trnp1Q80ZI1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trnp1Q80ZI1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trnp1Q80ZI1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trnp1Q80ZI1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.88■□□□□ 0.93
Trnp1Q80ZI1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.88■□□□□ 0.93
Trnp1Q80ZI1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trnp1Q80ZI1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.88■□□□□ 0.93
Trnp1Q80ZI1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trnp1Q80ZI1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trnp1Q80ZI1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trnp1Q80ZI1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trnp1Q80ZI1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Trnp1Q80ZI1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trnp1Q80ZI1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Trnp1Q80ZI1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trnp1Q80ZI1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trnp1Q80ZI1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trnp1Q80ZI1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trnp1Q80ZI1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trnp1Q80ZI1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trnp1Q80ZI1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trnp1Q80ZI1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trnp1Q80ZI1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trnp1Q80ZI1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Trnp1Q80ZI1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trnp1Q80ZI1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Trnp1Q80ZI1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trnp1Q80ZI1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trnp1Q80ZI1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
Trnp1Q80ZI1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trnp1Q80ZI1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.85■□□□□ 0.93
Trnp1Q80ZI1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trnp1Q80ZI1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trnp1Q80ZI1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.85■□□□□ 0.93
Trnp1Q80ZI1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trnp1Q80ZI1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Trnp1Q80ZI1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trnp1Q80ZI1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.84■□□□□ 0.93
Trnp1Q80ZI1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.84■□□□□ 0.93
Trnp1Q80ZI1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.84■□□□□ 0.93
Trnp1Q80ZI1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trnp1Q80ZI1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trnp1Q80ZI1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trnp1Q80ZI1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trnp1Q80ZI1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.83■□□□□ 0.93
Trnp1Q80ZI1 Gm27463-201ENSMUST00000183569 57 ntBASIC20.83■□□□□ 0.93
Trnp1Q80ZI1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trnp1Q80ZI1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trnp1Q80ZI1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.83■□□□□ 0.92
Trnp1Q80ZI1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trnp1Q80ZI1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trnp1Q80ZI1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.83■□□□□ 0.92
Trnp1Q80ZI1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trnp1Q80ZI1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trnp1Q80ZI1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trnp1Q80ZI1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trnp1Q80ZI1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trnp1Q80ZI1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trnp1Q80ZI1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trnp1Q80ZI1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trnp1Q80ZI1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.82■□□□□ 0.92
Trnp1Q80ZI1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.82■□□□□ 0.92
Trnp1Q80ZI1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trnp1Q80ZI1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trnp1Q80ZI1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trnp1Q80ZI1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.81■□□□□ 0.92
Trnp1Q80ZI1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trnp1Q80ZI1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trnp1Q80ZI1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trnp1Q80ZI1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trnp1Q80ZI1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.81■□□□□ 0.92
Trnp1Q80ZI1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trnp1Q80ZI1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trnp1Q80ZI1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trnp1Q80ZI1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms