Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Rpap1Q80TE0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Rpap1Q80TE0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC28.74■■■□□ 2.19
Rpap1Q80TE0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Rpap1Q80TE0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rpap1Q80TE0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC28.73■■■□□ 2.19
Rpap1Q80TE0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC28.73■■■□□ 2.19
Rpap1Q80TE0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rpap1Q80TE0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rpap1Q80TE0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rpap1Q80TE0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rpap1Q80TE0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Rpap1Q80TE0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rpap1Q80TE0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rpap1Q80TE0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC28.72■■■□□ 2.19
Rpap1Q80TE0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Rpap1Q80TE0 Gm6728-201ENSMUST00000178117 1065 ntBASIC28.72■■■□□ 2.19
Rpap1Q80TE0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
Rpap1Q80TE0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rpap1Q80TE0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rpap1Q80TE0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rpap1Q80TE0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rpap1Q80TE0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Rpap1Q80TE0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rpap1Q80TE0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC28.71■■■□□ 2.19
Rpap1Q80TE0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Rpap1Q80TE0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rpap1Q80TE0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rpap1Q80TE0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rpap1Q80TE0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rpap1Q80TE0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC28.7■■■□□ 2.19
Rpap1Q80TE0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC28.7■■■□□ 2.19
Rpap1Q80TE0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Rpap1Q80TE0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Rpap1Q80TE0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC28.7■■■□□ 2.19
Rpap1Q80TE0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Rpap1Q80TE0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Rpap1Q80TE0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Rpap1Q80TE0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC28.69■■■□□ 2.18
Rpap1Q80TE0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
Rpap1Q80TE0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
Rpap1Q80TE0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rpap1Q80TE0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Rpap1Q80TE0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rpap1Q80TE0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Rpap1Q80TE0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC28.69■■■□□ 2.18
Rpap1Q80TE0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
Rpap1Q80TE0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Rpap1Q80TE0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rpap1Q80TE0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Rpap1Q80TE0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Rpap1Q80TE0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Rpap1Q80TE0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC28.68■■■□□ 2.18
Rpap1Q80TE0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC28.68■■■□□ 2.18
Rpap1Q80TE0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Rpap1Q80TE0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Rpap1Q80TE0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC28.67■■■□□ 2.18
Rpap1Q80TE0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Rpap1Q80TE0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Rpap1Q80TE0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
Rpap1Q80TE0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC28.67■■■□□ 2.18
Rpap1Q80TE0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
Rpap1Q80TE0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC28.67■■■□□ 2.18
Rpap1Q80TE0 Gm23634-201ENSMUST00000175071 91 ntBASIC28.67■■■□□ 2.18
Rpap1Q80TE0 Gm27741-201ENSMUST00000185060 237 ntBASIC28.67■■■□□ 2.18
Rpap1Q80TE0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC28.67■■■□□ 2.18
Rpap1Q80TE0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Rpap1Q80TE0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Rpap1Q80TE0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rpap1Q80TE0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rpap1Q80TE0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Rpap1Q80TE0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
Rpap1Q80TE0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rpap1Q80TE0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rpap1Q80TE0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
Rpap1Q80TE0 AC166341.7-201ENSMUST00000221698 126 ntBASIC28.66■■■□□ 2.18
Rpap1Q80TE0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rpap1Q80TE0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
Rpap1Q80TE0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rpap1Q80TE0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rpap1Q80TE0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC28.65■■■□□ 2.18
Rpap1Q80TE0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC28.65■■■□□ 2.18
Rpap1Q80TE0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Rpap1Q80TE0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Rpap1Q80TE0 Gm18032-201ENSMUST00000222541 538 ntBASIC28.64■■■□□ 2.18
Rpap1Q80TE0 AC159205.6-201ENSMUST00000224935 887 ntBASIC28.64■■■□□ 2.18
Rpap1Q80TE0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Rpap1Q80TE0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
Rpap1Q80TE0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Rpap1Q80TE0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC28.64■■■□□ 2.18
Rpap1Q80TE0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC28.64■■■□□ 2.18
Rpap1Q80TE0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.17
Rpap1Q80TE0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rpap1Q80TE0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rpap1Q80TE0 Gm10517-202ENSMUST00000192970 758 ntBASIC28.63■■■□□ 2.17
Rpap1Q80TE0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rpap1Q80TE0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rpap1Q80TE0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rpap1Q80TE0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rpap1Q80TE0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms