Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ush1gQ80T11 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ush1gQ80T11 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ush1gQ80T11 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ush1gQ80T11 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ush1gQ80T11 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Ush1gQ80T11 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.11■□□□□ 0.81
Ush1gQ80T11 Gm11249-201ENSMUST00000117071 859 ntBASIC20.11■□□□□ 0.81
Ush1gQ80T11 Gm15378-201ENSMUST00000121894 207 ntBASIC20.11■□□□□ 0.81
Ush1gQ80T11 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ush1gQ80T11 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.11■□□□□ 0.81
Ush1gQ80T11 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.11■□□□□ 0.81
Ush1gQ80T11 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ush1gQ80T11 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ush1gQ80T11 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ush1gQ80T11 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ush1gQ80T11 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ush1gQ80T11 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ush1gQ80T11 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Ush1gQ80T11 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ush1gQ80T11 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ush1gQ80T11 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ush1gQ80T11 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Ush1gQ80T11 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ush1gQ80T11 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ush1gQ80T11 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ush1gQ80T11 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ush1gQ80T11 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Ush1gQ80T11 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ush1gQ80T11 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ush1gQ80T11 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ush1gQ80T11 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ush1gQ80T11 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ush1gQ80T11 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ush1gQ80T11 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.09■□□□□ 0.81
Ush1gQ80T11 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.09■□□□□ 0.81
Ush1gQ80T11 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ush1gQ80T11 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ush1gQ80T11 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ush1gQ80T11 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ush1gQ80T11 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ush1gQ80T11 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.08■□□□□ 0.81
Ush1gQ80T11 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ush1gQ80T11 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.08■□□□□ 0.81
Ush1gQ80T11 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ush1gQ80T11 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.08■□□□□ 0.8
Ush1gQ80T11 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ush1gQ80T11 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ush1gQ80T11 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ush1gQ80T11 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.07■□□□□ 0.8
Ush1gQ80T11 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ush1gQ80T11 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ush1gQ80T11 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ush1gQ80T11 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ush1gQ80T11 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ush1gQ80T11 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ush1gQ80T11 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ush1gQ80T11 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ush1gQ80T11 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ush1gQ80T11 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Ush1gQ80T11 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ush1gQ80T11 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ush1gQ80T11 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.06■□□□□ 0.8
Ush1gQ80T11 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ush1gQ80T11 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ush1gQ80T11 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.05■□□□□ 0.8
Ush1gQ80T11 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ush1gQ80T11 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ush1gQ80T11 Gm2399-201ENSMUST00000104944 225 ntBASIC20.05■□□□□ 0.8
Ush1gQ80T11 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.05■□□□□ 0.8
Ush1gQ80T11 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.05■□□□□ 0.8
Ush1gQ80T11 Gm10698-201ENSMUST00000182663 604 ntBASIC20.05■□□□□ 0.8
Ush1gQ80T11 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.05■□□□□ 0.8
Ush1gQ80T11 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.05■□□□□ 0.8
Ush1gQ80T11 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ush1gQ80T11 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ush1gQ80T11 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ush1gQ80T11 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ush1gQ80T11 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ush1gQ80T11 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ush1gQ80T11 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ush1gQ80T11 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ush1gQ80T11 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.04■□□□□ 0.8
Ush1gQ80T11 Gm13158-201ENSMUST00000122007 736 ntBASIC20.04■□□□□ 0.8
Ush1gQ80T11 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.04■□□□□ 0.8
Ush1gQ80T11 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ush1gQ80T11 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.04■□□□□ 0.8
Ush1gQ80T11 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Ush1gQ80T11 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.04■□□□□ 0.8
Ush1gQ80T11 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ush1gQ80T11 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ush1gQ80T11 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ush1gQ80T11 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Ush1gQ80T11 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ush1gQ80T11 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ush1gQ80T11 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ush1gQ80T11 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ush1gQ80T11 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Ush1gQ80T11 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.03■□□□□ 0.8
Ush1gQ80T11 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms