Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ShprhQ7TPQ3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ShprhQ7TPQ3 Gm15853-202ENSMUST00000195518 2041 ntBASIC26.4■■□□□ 1.82
ShprhQ7TPQ3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
ShprhQ7TPQ3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
ShprhQ7TPQ3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ShprhQ7TPQ3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ShprhQ7TPQ3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
ShprhQ7TPQ3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.82
ShprhQ7TPQ3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC26.39■■□□□ 1.82
ShprhQ7TPQ3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ShprhQ7TPQ3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ShprhQ7TPQ3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC26.39■■□□□ 1.82
ShprhQ7TPQ3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ShprhQ7TPQ3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ShprhQ7TPQ3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ShprhQ7TPQ3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
ShprhQ7TPQ3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC26.39■■□□□ 1.81
ShprhQ7TPQ3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC26.39■■□□□ 1.81
ShprhQ7TPQ3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ShprhQ7TPQ3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ShprhQ7TPQ3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC26.38■■□□□ 1.81
ShprhQ7TPQ3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
ShprhQ7TPQ3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC26.38■■□□□ 1.81
ShprhQ7TPQ3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC26.38■■□□□ 1.81
ShprhQ7TPQ3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC26.38■■□□□ 1.81
ShprhQ7TPQ3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC26.38■■□□□ 1.81
ShprhQ7TPQ3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
ShprhQ7TPQ3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ShprhQ7TPQ3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ShprhQ7TPQ3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC26.38■■□□□ 1.81
ShprhQ7TPQ3 Gm20634-201ENSMUST00000090779 2956 ntBASIC26.38■■□□□ 1.81
ShprhQ7TPQ3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
ShprhQ7TPQ3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ShprhQ7TPQ3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ShprhQ7TPQ3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC26.37■■□□□ 1.81
ShprhQ7TPQ3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ShprhQ7TPQ3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
ShprhQ7TPQ3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
ShprhQ7TPQ3 Gm6659-201ENSMUST00000174752 547 ntBASIC26.37■■□□□ 1.81
ShprhQ7TPQ3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
ShprhQ7TPQ3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
ShprhQ7TPQ3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ShprhQ7TPQ3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ShprhQ7TPQ3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ShprhQ7TPQ3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC26.35■■□□□ 1.81
ShprhQ7TPQ3 AC166341.7-201ENSMUST00000221698 126 ntBASIC26.35■■□□□ 1.81
ShprhQ7TPQ3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ShprhQ7TPQ3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ShprhQ7TPQ3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
ShprhQ7TPQ3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC26.35■■□□□ 1.81
ShprhQ7TPQ3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ShprhQ7TPQ3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
ShprhQ7TPQ3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ShprhQ7TPQ3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ShprhQ7TPQ3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ShprhQ7TPQ3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ShprhQ7TPQ3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ShprhQ7TPQ3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ShprhQ7TPQ3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC26.34■■□□□ 1.81
ShprhQ7TPQ3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ShprhQ7TPQ3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ShprhQ7TPQ3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
ShprhQ7TPQ3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC26.32■■□□□ 1.8
ShprhQ7TPQ3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
ShprhQ7TPQ3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ShprhQ7TPQ3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ShprhQ7TPQ3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ShprhQ7TPQ3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
ShprhQ7TPQ3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ShprhQ7TPQ3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC26.32■■□□□ 1.8
ShprhQ7TPQ3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ShprhQ7TPQ3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ShprhQ7TPQ3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ShprhQ7TPQ3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
ShprhQ7TPQ3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ShprhQ7TPQ3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ShprhQ7TPQ3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
ShprhQ7TPQ3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ShprhQ7TPQ3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
ShprhQ7TPQ3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC26.31■■□□□ 1.8
ShprhQ7TPQ3 Gm18032-201ENSMUST00000222541 538 ntBASIC26.31■■□□□ 1.8
ShprhQ7TPQ3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ShprhQ7TPQ3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC26.31■■□□□ 1.8
ShprhQ7TPQ3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
ShprhQ7TPQ3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ShprhQ7TPQ3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ShprhQ7TPQ3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC26.3■■□□□ 1.8
ShprhQ7TPQ3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
ShprhQ7TPQ3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ShprhQ7TPQ3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ShprhQ7TPQ3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
ShprhQ7TPQ3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ShprhQ7TPQ3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ShprhQ7TPQ3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
ShprhQ7TPQ3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
ShprhQ7TPQ3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
ShprhQ7TPQ3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ShprhQ7TPQ3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC26.28■■□□□ 1.8
ShprhQ7TPQ3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC26.28■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms