Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm37292-201ENSMUST00000192062 758 ntBASIC16.23■□□□□ 0.19
Snrnp40Q6PE01 Timm23-208ENSMUST00000226683 750 ntBASIC16.23■□□□□ 0.19
Snrnp40Q6PE01 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Snrnp40Q6PE01 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Snrnp40Q6PE01 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Snrnp40Q6PE01 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.23■□□□□ 0.19
Snrnp40Q6PE01 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Snrnp40Q6PE01 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Gm6659-201ENSMUST00000174752 547 ntBASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Gm7889-201ENSMUST00000185591 958 ntBASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Gm7367-201ENSMUST00000057611 492 ntBASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp40Q6PE01 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp40Q6PE01 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Snrnp40Q6PE01 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Gm38285-201ENSMUST00000192928 922 ntBASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Gm3375-201ENSMUST00000203929 796 ntBASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp40Q6PE01 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 Gm12382-201ENSMUST00000122005 922 ntBASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.19■□□□□ 0.18
Snrnp40Q6PE01 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snrnp40Q6PE01 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snrnp40Q6PE01 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snrnp40Q6PE01 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Snrnp40Q6PE01 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snrnp40Q6PE01 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Snrnp40Q6PE01 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Snrnp40Q6PE01 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.18■□□□□ 0.18
Snrnp40Q6PE01 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snrnp40Q6PE01 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snrnp40Q6PE01 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.18■□□□□ 0.18
Snrnp40Q6PE01 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Snrnp40Q6PE01 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snrnp40Q6PE01 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snrnp40Q6PE01 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms