Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Smarcd1Q61466 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.19■□□□□ 0.66
Smarcd1Q61466 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd1Q61466 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.19■□□□□ 0.66
Smarcd1Q61466 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Smarcd1Q61466 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd1Q61466 Trmt13-210ENSMUST00000198454 880 ntBASIC19.19■□□□□ 0.66
Smarcd1Q61466 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.19■□□□□ 0.66
Smarcd1Q61466 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd1Q61466 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.19■□□□□ 0.66
Smarcd1Q61466 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd1Q61466 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd1Q61466 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd1Q61466 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd1Q61466 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd1Q61466 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.18■□□□□ 0.66
Smarcd1Q61466 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd1Q61466 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd1Q61466 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.18■□□□□ 0.66
Smarcd1Q61466 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd1Q61466 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Smarcd1Q61466 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd1Q61466 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd1Q61466 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd1Q61466 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd1Q61466 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd1Q61466 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd1Q61466 Dio3-201ENSMUST00000097228 1449 ntBASIC19.17■□□□□ 0.66
Smarcd1Q61466 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd1Q61466 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd1Q61466 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd1Q61466 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd1Q61466 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd1Q61466 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd1Q61466 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.17■□□□□ 0.66
Smarcd1Q61466 Gm27275-201ENSMUST00000184318 272 ntBASIC19.17■□□□□ 0.66
Smarcd1Q61466 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd1Q61466 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd1Q61466 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd1Q61466 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd1Q61466 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Smarcd1Q61466 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Smarcd1Q61466 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd1Q61466 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.16■□□□□ 0.66
Smarcd1Q61466 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd1Q61466 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.16■□□□□ 0.66
Smarcd1Q61466 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.16■□□□□ 0.66
Smarcd1Q61466 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.16■□□□□ 0.66
Smarcd1Q61466 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.16■□□□□ 0.66
Smarcd1Q61466 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Smarcd1Q61466 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd1Q61466 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smarcd1Q61466 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd1Q61466 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Smarcd1Q61466 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.15■□□□□ 0.66
Smarcd1Q61466 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd1Q61466 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd1Q61466 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd1Q61466 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.15■□□□□ 0.66
Smarcd1Q61466 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd1Q61466 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd1Q61466 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.15■□□□□ 0.66
Smarcd1Q61466 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd1Q61466 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd1Q61466 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd1Q61466 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smarcd1Q61466 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smarcd1Q61466 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smarcd1Q61466 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd1Q61466 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd1Q61466 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.14■□□□□ 0.65
Smarcd1Q61466 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.14■□□□□ 0.65
Smarcd1Q61466 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd1Q61466 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Smarcd1Q61466 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.14■□□□□ 0.65
Smarcd1Q61466 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd1Q61466 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Smarcd1Q61466 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd1Q61466 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd1Q61466 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd1Q61466 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd1Q61466 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd1Q61466 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Smarcd1Q61466 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd1Q61466 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd1Q61466 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.13■□□□□ 0.65
Smarcd1Q61466 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.13■□□□□ 0.65
Smarcd1Q61466 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd1Q61466 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd1Q61466 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.13■□□□□ 0.65
Smarcd1Q61466 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd1Q61466 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd1Q61466 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd1Q61466 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.13■□□□□ 0.65
Smarcd1Q61466 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd1Q61466 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd1Q61466 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcd1Q61466 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcd1Q61466 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms