Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ift88Q61371 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ift88Q61371 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Ift88Q61371 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ift88Q61371 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ift88Q61371 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ift88Q61371 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.37■□□□□ 0.85
Ift88Q61371 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ift88Q61371 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ift88Q61371 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ift88Q61371 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ift88Q61371 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ift88Q61371 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ift88Q61371 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ift88Q61371 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.36■□□□□ 0.85
Ift88Q61371 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ift88Q61371 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ift88Q61371 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ift88Q61371 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ift88Q61371 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.36■□□□□ 0.85
Ift88Q61371 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ift88Q61371 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.36■□□□□ 0.85
Ift88Q61371 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.36■□□□□ 0.85
Ift88Q61371 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ift88Q61371 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ift88Q61371 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Ift88Q61371 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ift88Q61371 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ift88Q61371 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ift88Q61371 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ift88Q61371 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ift88Q61371 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ift88Q61371 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ift88Q61371 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ift88Q61371 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.35■□□□□ 0.85
Ift88Q61371 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.35■□□□□ 0.85
Ift88Q61371 Gm45417-201ENSMUST00000209533 758 ntBASIC20.35■□□□□ 0.85
Ift88Q61371 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ift88Q61371 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ift88Q61371 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ift88Q61371 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ift88Q61371 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Ift88Q61371 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ift88Q61371 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ift88Q61371 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ift88Q61371 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ift88Q61371 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ift88Q61371 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Ift88Q61371 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ift88Q61371 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ift88Q61371 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ift88Q61371 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ift88Q61371 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Ift88Q61371 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.34■□□□□ 0.85
Ift88Q61371 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.34■□□□□ 0.85
Ift88Q61371 Gm43017-201ENSMUST00000198296 752 ntBASIC20.34■□□□□ 0.85
Ift88Q61371 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ift88Q61371 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ift88Q61371 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.34■□□□□ 0.85
Ift88Q61371 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ift88Q61371 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Ift88Q61371 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ift88Q61371 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ift88Q61371 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ift88Q61371 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ift88Q61371 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.33■□□□□ 0.85
Ift88Q61371 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Ift88Q61371 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ift88Q61371 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ift88Q61371 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ift88Q61371 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ift88Q61371 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ift88Q61371 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ift88Q61371 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.32■□□□□ 0.84
Ift88Q61371 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ift88Q61371 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ift88Q61371 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ift88Q61371 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ift88Q61371 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ift88Q61371 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.32■□□□□ 0.84
Ift88Q61371 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Ift88Q61371 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ift88Q61371 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ift88Q61371 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ift88Q61371 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ift88Q61371 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ift88Q61371 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.32■□□□□ 0.84
Ift88Q61371 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ift88Q61371 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ift88Q61371 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.32■□□□□ 0.84
Ift88Q61371 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ift88Q61371 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.32■□□□□ 0.84
Ift88Q61371 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ift88Q61371 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ift88Q61371 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ift88Q61371 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ift88Q61371 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.31■□□□□ 0.84
Ift88Q61371 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ift88Q61371 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.31■□□□□ 0.84
Ift88Q61371 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms