Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC26.83■■□□□ 1.89
Ptch1Q61115 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC26.83■■□□□ 1.89
Ptch1Q61115 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Ptch1Q61115 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC26.83■■□□□ 1.88
Ptch1Q61115 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Ptch1Q61115 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ptch1Q61115 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ptch1Q61115 Gm7461-201ENSMUST00000058918 827 ntBASIC26.82■■□□□ 1.88
Ptch1Q61115 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ptch1Q61115 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ptch1Q61115 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ptch1Q61115 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ptch1Q61115 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ptch1Q61115 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ptch1Q61115 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ptch1Q61115 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ptch1Q61115 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ptch1Q61115 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Ptch1Q61115 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC26.81■■□□□ 1.88
Ptch1Q61115 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC26.81■■□□□ 1.88
Ptch1Q61115 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC26.81■■□□□ 1.88
Ptch1Q61115 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
Ptch1Q61115 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Ptch1Q61115 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.8■■□□□ 1.88
Ptch1Q61115 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Ptch1Q61115 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC26.8■■□□□ 1.88
Ptch1Q61115 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ptch1Q61115 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ptch1Q61115 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ptch1Q61115 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ptch1Q61115 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Ptch1Q61115 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ptch1Q61115 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Ptch1Q61115 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC26.79■■□□□ 1.88
Ptch1Q61115 Mir2861-201ENSMUST00000175539 82 ntBASIC26.79■■□□□ 1.88
Ptch1Q61115 AC130713.1-201ENSMUST00000228853 1096 ntBASIC26.79■■□□□ 1.88
Ptch1Q61115 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ptch1Q61115 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ptch1Q61115 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Ptch1Q61115 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ptch1Q61115 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Ptch1Q61115 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ptch1Q61115 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ptch1Q61115 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ptch1Q61115 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ptch1Q61115 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
Ptch1Q61115 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ptch1Q61115 Gm22697-201ENSMUST00000175194 63 ntBASIC26.77■■□□□ 1.88
Ptch1Q61115 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ptch1Q61115 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ptch1Q61115 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Ptch1Q61115 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Ptch1Q61115 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ptch1Q61115 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ptch1Q61115 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Ptch1Q61115 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ptch1Q61115 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ptch1Q61115 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
Ptch1Q61115 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
Ptch1Q61115 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC26.76■■□□□ 1.87
Ptch1Q61115 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Ptch1Q61115 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ptch1Q61115 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Ptch1Q61115 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC26.75■■□□□ 1.87
Ptch1Q61115 Gm4217-201ENSMUST00000182243 1002 ntBASIC26.75■■□□□ 1.87
Ptch1Q61115 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC26.75■■□□□ 1.87
Ptch1Q61115 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Ptch1Q61115 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ptch1Q61115 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ptch1Q61115 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC26.74■■□□□ 1.87
Ptch1Q61115 Gm28033-201ENSMUST00000184224 96 ntBASIC26.74■■□□□ 1.87
Ptch1Q61115 Gm38027-201ENSMUST00000192315 235 ntBASIC26.74■■□□□ 1.87
Ptch1Q61115 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ptch1Q61115 Gm44544-201ENSMUST00000207052 1844 ntBASIC26.74■■□□□ 1.87
Ptch1Q61115 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
Ptch1Q61115 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ptch1Q61115 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ptch1Q61115 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ptch1Q61115 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ptch1Q61115 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ptch1Q61115 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ptch1Q61115 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC26.73■■□□□ 1.87
Ptch1Q61115 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ptch1Q61115 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ptch1Q61115 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Ptch1Q61115 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Ptch1Q61115 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ptch1Q61115 AC126028.2-201ENSMUST00000228100 1833 ntBASIC26.72■■□□□ 1.87
Ptch1Q61115 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ptch1Q61115 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ptch1Q61115 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Ptch1Q61115 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Ptch1Q61115 Gm2274-201ENSMUST00000184539 609 ntBASIC26.72■■□□□ 1.87
Ptch1Q61115 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC26.72■■□□□ 1.87
Ptch1Q61115 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC26.72■■□□□ 1.87
Ptch1Q61115 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Ptch1Q61115 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ptch1Q61115 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ptch1Q61115 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC26.71■■□□□ 1.87
Ptch1Q61115 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms