Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Foxd3Q61060 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Foxd3Q61060 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Foxd3Q61060 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Foxd3Q61060 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Foxd3Q61060 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Foxd3Q61060 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Foxd3Q61060 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.85■□□□□ 0.29
Foxd3Q61060 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.85■□□□□ 0.29
Foxd3Q61060 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Foxd3Q61060 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Foxd3Q61060 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Foxd3Q61060 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Foxd3Q61060 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Foxd3Q61060 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Foxd3Q61060 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Foxd3Q61060 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Foxd3Q61060 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Foxd3Q61060 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Foxd3Q61060 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Foxd3Q61060 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.84■□□□□ 0.29
Foxd3Q61060 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Foxd3Q61060 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Foxd3Q61060 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.84■□□□□ 0.29
Foxd3Q61060 Gm10033-202ENSMUST00000211874 928 ntBASIC16.84■□□□□ 0.29
Foxd3Q61060 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Foxd3Q61060 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Foxd3Q61060 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Foxd3Q61060 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Foxd3Q61060 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Foxd3Q61060 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Foxd3Q61060 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Foxd3Q61060 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.84■□□□□ 0.29
Foxd3Q61060 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Foxd3Q61060 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Foxd3Q61060 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Foxd3Q61060 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Foxd3Q61060 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Foxd3Q61060 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.83■□□□□ 0.28
Foxd3Q61060 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.83■□□□□ 0.28
Foxd3Q61060 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Foxd3Q61060 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Foxd3Q61060 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Foxd3Q61060 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Foxd3Q61060 Gm18671-201ENSMUST00000214826 683 ntBASIC16.83■□□□□ 0.28
Foxd3Q61060 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.83■□□□□ 0.28
Foxd3Q61060 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.83■□□□□ 0.28
Foxd3Q61060 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Foxd3Q61060 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Foxd3Q61060 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Foxd3Q61060 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Foxd3Q61060 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.83■□□□□ 0.28
Foxd3Q61060 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Foxd3Q61060 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Foxd3Q61060 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Foxd3Q61060 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxd3Q61060 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxd3Q61060 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Foxd3Q61060 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.82■□□□□ 0.28
Foxd3Q61060 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.82■□□□□ 0.28
Foxd3Q61060 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Foxd3Q61060 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Foxd3Q61060 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxd3Q61060 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Foxd3Q61060 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxd3Q61060 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxd3Q61060 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Foxd3Q61060 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxd3Q61060 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxd3Q61060 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxd3Q61060 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxd3Q61060 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxd3Q61060 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.81■□□□□ 0.28
Foxd3Q61060 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Foxd3Q61060 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxd3Q61060 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxd3Q61060 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.81■□□□□ 0.28
Foxd3Q61060 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.81■□□□□ 0.28
Foxd3Q61060 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.81■□□□□ 0.28
Foxd3Q61060 AV356131-201ENSMUST00000206201 750 ntBASIC16.81■□□□□ 0.28
Foxd3Q61060 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxd3Q61060 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxd3Q61060 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxd3Q61060 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxd3Q61060 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxd3Q61060 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxd3Q61060 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxd3Q61060 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Foxd3Q61060 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Foxd3Q61060 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxd3Q61060 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Foxd3Q61060 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxd3Q61060 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Foxd3Q61060 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Foxd3Q61060 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Foxd3Q61060 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Foxd3Q61060 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxd3Q61060 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxd3Q61060 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxd3Q61060 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms