Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a4Q60857 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a4Q60857 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.86■□□□□ 0.61
Slc6a4Q60857 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.86■□□□□ 0.61
Slc6a4Q60857 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a4Q60857 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a4Q60857 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.86■□□□□ 0.61
Slc6a4Q60857 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a4Q60857 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a4Q60857 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Slc6a4Q60857 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Slc6a4Q60857 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a4Q60857 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a4Q60857 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.85■□□□□ 0.61
Slc6a4Q60857 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a4Q60857 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a4Q60857 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Slc6a4Q60857 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.85■□□□□ 0.61
Slc6a4Q60857 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a4Q60857 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a4Q60857 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.85■□□□□ 0.61
Slc6a4Q60857 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a4Q60857 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.85■□□□□ 0.61
Slc6a4Q60857 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a4Q60857 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.85■□□□□ 0.61
Slc6a4Q60857 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.85■□□□□ 0.61
Slc6a4Q60857 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a4Q60857 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a4Q60857 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a4Q60857 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a4Q60857 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a4Q60857 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a4Q60857 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a4Q60857 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a4Q60857 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a4Q60857 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a4Q60857 Gm5643-201ENSMUST00000117081 966 ntBASIC18.84■□□□□ 0.61
Slc6a4Q60857 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a4Q60857 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a4Q60857 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a4Q60857 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Slc6a4Q60857 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a4Q60857 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.84■□□□□ 0.61
Slc6a4Q60857 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a4Q60857 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.84■□□□□ 0.61
Slc6a4Q60857 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a4Q60857 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a4Q60857 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a4Q60857 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a4Q60857 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a4Q60857 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.83■□□□□ 0.61
Slc6a4Q60857 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.83■□□□□ 0.61
Slc6a4Q60857 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.83■□□□□ 0.6
Slc6a4Q60857 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a4Q60857 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a4Q60857 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a4Q60857 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Slc6a4Q60857 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.82■□□□□ 0.6
Slc6a4Q60857 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.82■□□□□ 0.6
Slc6a4Q60857 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Slc6a4Q60857 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a4Q60857 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a4Q60857 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a4Q60857 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a4Q60857 Gm11927-201ENSMUST00000118472 759 ntBASIC18.81■□□□□ 0.6
Slc6a4Q60857 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
Slc6a4Q60857 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a4Q60857 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a4Q60857 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Slc6a4Q60857 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.8■□□□□ 0.6
Slc6a4Q60857 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a4Q60857 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a4Q60857 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a4Q60857 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.8■□□□□ 0.6
Slc6a4Q60857 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a4Q60857 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a4Q60857 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.8■□□□□ 0.6
Slc6a4Q60857 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a4Q60857 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a4Q60857 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.79■□□□□ 0.6
Slc6a4Q60857 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a4Q60857 Flg-201ENSMUST00000050758 1488 ntBASIC18.79■□□□□ 0.6
Slc6a4Q60857 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms