Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1h4Q60641 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h4Q60641 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h4Q60641 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h4Q60641 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h4Q60641 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h4Q60641 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h4Q60641 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h4Q60641 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Nr1h4Q60641 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h4Q60641 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h4Q60641 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h4Q60641 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h4Q60641 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1h4Q60641 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nr1h4Q60641 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nr1h4Q60641 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nr1h4Q60641 Rarb-207ENSMUST00000225921 2756 ntBASIC17.51■□□□□ 0.39
Nr1h4Q60641 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h4Q60641 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.51■□□□□ 0.39
Nr1h4Q60641 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h4Q60641 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.51■□□□□ 0.39
Nr1h4Q60641 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.51■□□□□ 0.39
Nr1h4Q60641 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h4Q60641 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h4Q60641 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.51■□□□□ 0.39
Nr1h4Q60641 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h4Q60641 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h4Q60641 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h4Q60641 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h4Q60641 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h4Q60641 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h4Q60641 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.51■□□□□ 0.39
Nr1h4Q60641 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nr1h4Q60641 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nr1h4Q60641 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nr1h4Q60641 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nr1h4Q60641 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.5■□□□□ 0.39
Nr1h4Q60641 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.5■□□□□ 0.39
Nr1h4Q60641 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr1h4Q60641 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr1h4Q60641 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nr1h4Q60641 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h4Q60641 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h4Q60641 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h4Q60641 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h4Q60641 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.49■□□□□ 0.39
Nr1h4Q60641 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h4Q60641 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.49■□□□□ 0.39
Nr1h4Q60641 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.49■□□□□ 0.39
Nr1h4Q60641 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h4Q60641 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h4Q60641 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h4Q60641 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h4Q60641 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h4Q60641 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr1h4Q60641 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nr1h4Q60641 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h4Q60641 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h4Q60641 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Nr1h4Q60641 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h4Q60641 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h4Q60641 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h4Q60641 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h4Q60641 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.48■□□□□ 0.39
Nr1h4Q60641 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h4Q60641 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h4Q60641 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr1h4Q60641 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h4Q60641 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h4Q60641 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nr1h4Q60641 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nr1h4Q60641 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h4Q60641 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Nr1h4Q60641 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Nr1h4Q60641 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Nr1h4Q60641 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h4Q60641 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Nr1h4Q60641 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nr1h4Q60641 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h4Q60641 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h4Q60641 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h4Q60641 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.47■□□□□ 0.39
Nr1h4Q60641 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h4Q60641 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h4Q60641 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nr1h4Q60641 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h4Q60641 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h4Q60641 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nr1h4Q60641 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms