Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15-1-dv6-1Q5R1D2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms