Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd8Q09XV5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd8Q09XV5 Gm11950-201ENSMUST00000121615 838 ntBASIC16.59■□□□□ 0.25
Chd8Q09XV5 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.59■□□□□ 0.25
Chd8Q09XV5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd8Q09XV5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd8Q09XV5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.59■□□□□ 0.25
Chd8Q09XV5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Chd8Q09XV5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd8Q09XV5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Chd8Q09XV5 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chd8Q09XV5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Chd8Q09XV5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Chd8Q09XV5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd8Q09XV5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd8Q09XV5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd8Q09XV5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd8Q09XV5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.58■□□□□ 0.25
Chd8Q09XV5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chd8Q09XV5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd8Q09XV5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd8Q09XV5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.58■□□□□ 0.24
Chd8Q09XV5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Chd8Q09XV5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.58■□□□□ 0.24
Chd8Q09XV5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd8Q09XV5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd8Q09XV5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chd8Q09XV5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.57■□□□□ 0.24
Chd8Q09XV5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd8Q09XV5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Chd8Q09XV5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd8Q09XV5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd8Q09XV5 Gm8000-201ENSMUST00000188378 592 ntBASIC16.57■□□□□ 0.24
Chd8Q09XV5 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.57■□□□□ 0.24
Chd8Q09XV5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd8Q09XV5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.57■□□□□ 0.24
Chd8Q09XV5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd8Q09XV5 Gm15920-201ENSMUST00000118998 402 ntBASIC16.57■□□□□ 0.24
Chd8Q09XV5 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.57■□□□□ 0.24
Chd8Q09XV5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd8Q09XV5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.57■□□□□ 0.24
Chd8Q09XV5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd8Q09XV5 Gm13474-201ENSMUST00000122466 815 ntBASIC16.55■□□□□ 0.24
Chd8Q09XV5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd8Q09XV5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd8Q09XV5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd8Q09XV5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.55■□□□□ 0.24
Chd8Q09XV5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.55■□□□□ 0.24
Chd8Q09XV5 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd8Q09XV5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd8Q09XV5 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.55■□□□□ 0.24
Chd8Q09XV5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.55■□□□□ 0.24
Chd8Q09XV5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd8Q09XV5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd8Q09XV5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd8Q09XV5 AA386476-201ENSMUST00000098781 1665 ntBASIC16.55■□□□□ 0.24
Chd8Q09XV5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd8Q09XV5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.55■□□□□ 0.24
Chd8Q09XV5 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd8Q09XV5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd8Q09XV5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Chd8Q09XV5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.54■□□□□ 0.24
Chd8Q09XV5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd8Q09XV5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd8Q09XV5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd8Q09XV5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd8Q09XV5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd8Q09XV5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Chd8Q09XV5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd8Q09XV5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd8Q09XV5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Gm5364-201ENSMUST00000216789 889 ntBASIC16.53■□□□□ 0.24
Chd8Q09XV5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms