Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tff1Q08423 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tff1Q08423 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tff1Q08423 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.26■□□□□ 0.03
Tff1Q08423 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tff1Q08423 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tff1Q08423 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tff1Q08423 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tff1Q08423 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tff1Q08423 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tff1Q08423 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tff1Q08423 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
Tff1Q08423 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tff1Q08423 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tff1Q08423 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tff1Q08423 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tff1Q08423 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.26■□□□□ 0.03
Tff1Q08423 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tff1Q08423 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tff1Q08423 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tff1Q08423 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.25■□□□□ 0.03
Tff1Q08423 Gm11421-201ENSMUST00000122124 294 ntBASIC15.25■□□□□ 0.03
Tff1Q08423 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tff1Q08423 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.25■□□□□ 0.03
Tff1Q08423 Gm42778-201ENSMUST00000199644 553 ntBASIC15.25■□□□□ 0.03
Tff1Q08423 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.25■□□□□ 0.03
Tff1Q08423 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tff1Q08423 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tff1Q08423 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tff1Q08423 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tff1Q08423 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tff1Q08423 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tff1Q08423 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tff1Q08423 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tff1Q08423 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tff1Q08423 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tff1Q08423 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tff1Q08423 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.24■□□□□ 0.03
Tff1Q08423 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tff1Q08423 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tff1Q08423 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tff1Q08423 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tff1Q08423 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.24■□□□□ 0.03
Tff1Q08423 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.24■□□□□ 0.03
Tff1Q08423 AV356131-201ENSMUST00000206201 750 ntBASIC15.24■□□□□ 0.03
Tff1Q08423 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tff1Q08423 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tff1Q08423 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tff1Q08423 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tff1Q08423 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.24■□□□□ 0.03
Tff1Q08423 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tff1Q08423 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tff1Q08423 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tff1Q08423 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Tff1Q08423 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Tff1Q08423 Smad6-203ENSMUST00000179458 273 ntBASIC15.23■□□□□ 0.03
Tff1Q08423 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tff1Q08423 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tff1Q08423 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Tff1Q08423 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tff1Q08423 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.23■□□□□ 0.03
Tff1Q08423 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tff1Q08423 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tff1Q08423 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tff1Q08423 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.23■□□□□ 0.03
Tff1Q08423 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tff1Q08423 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tff1Q08423 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 Gm7860-201ENSMUST00000121190 879 ntBASIC15.22■□□□□ 0.03
Tff1Q08423 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.22■□□□□ 0.03
Tff1Q08423 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.22■□□□□ 0.03
Tff1Q08423 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.22■□□□□ 0.03
Tff1Q08423 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tff1Q08423 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tff1Q08423 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tff1Q08423 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tff1Q08423 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Tff1Q08423 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.21■□□□□ 0.03
Tff1Q08423 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tff1Q08423 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tff1Q08423 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Tff1Q08423 Gm10602-201ENSMUST00000098239 609 ntBASIC15.21■□□□□ 0.03
Tff1Q08423 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tff1Q08423 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tff1Q08423 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms