Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.53■□□□□ 0.56
Smad4P97471 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Smad4P97471 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.53■□□□□ 0.56
Smad4P97471 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.53■□□□□ 0.56
Smad4P97471 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad4P97471 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad4P97471 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Smad4P97471 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Smad4P97471 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad4P97471 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.53■□□□□ 0.56
Smad4P97471 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad4P97471 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Smad4P97471 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad4P97471 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad4P97471 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad4P97471 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Smad4P97471 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.52■□□□□ 0.56
Smad4P97471 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Smad4P97471 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Smad4P97471 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad4P97471 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad4P97471 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad4P97471 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Smad4P97471 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Smad4P97471 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smad4P97471 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smad4P97471 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.51■□□□□ 0.55
Smad4P97471 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.51■□□□□ 0.55
Smad4P97471 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smad4P97471 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad4P97471 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad4P97471 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad4P97471 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad4P97471 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad4P97471 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad4P97471 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.51■□□□□ 0.55
Smad4P97471 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Smad4P97471 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.51■□□□□ 0.55
Smad4P97471 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smad4P97471 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smad4P97471 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smad4P97471 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smad4P97471 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.5■□□□□ 0.55
Smad4P97471 Gm12085-201ENSMUST00000119263 940 ntBASIC18.5■□□□□ 0.55
Smad4P97471 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smad4P97471 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smad4P97471 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Smad4P97471 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smad4P97471 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Smad4P97471 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smad4P97471 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad4P97471 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad4P97471 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad4P97471 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Smad4P97471 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad4P97471 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad4P97471 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Smad4P97471 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad4P97471 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Smad4P97471 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smad4P97471 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smad4P97471 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smad4P97471 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smad4P97471 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smad4P97471 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Smad4P97471 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smad4P97471 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.48■□□□□ 0.55
Smad4P97471 Gm44771-201ENSMUST00000206975 626 ntBASIC18.48■□□□□ 0.55
Smad4P97471 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.48■□□□□ 0.55
Smad4P97471 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.48■□□□□ 0.55
Smad4P97471 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smad4P97471 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Smad4P97471 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.47■□□□□ 0.55
Smad4P97471 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.47■□□□□ 0.55
Smad4P97471 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smad4P97471 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.47■□□□□ 0.55
Smad4P97471 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smad4P97471 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smad4P97471 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smad4P97471 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.47■□□□□ 0.55
Smad4P97471 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smad4P97471 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smad4P97471 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smad4P97471 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smad4P97471 Gm7153-201ENSMUST00000117092 455 ntBASIC18.46■□□□□ 0.55
Smad4P97471 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.46■□□□□ 0.55
Smad4P97471 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Smad4P97471 Gm27704-201ENSMUST00000185094 107 ntBASIC18.46■□□□□ 0.55
Smad4P97471 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.46■□□□□ 0.55
Smad4P97471 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Smad4P97471 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Smad4P97471 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Smad4P97471 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.46■□□□□ 0.55
Smad4P97471 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Smad4P97471 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smad4P97471 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Smad4P97471 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Smad4P97471 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smad4P97471 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smad4P97471 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms