Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ctdsp1P58466 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdsp1P58466 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdsp1P58466 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.47□□□□□ -0.09
Ctdsp1P58466 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdsp1P58466 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdsp1P58466 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ctdsp1P58466 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Ctdsp1P58466 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdsp1P58466 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdsp1P58466 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdsp1P58466 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdsp1P58466 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdsp1P58466 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ctdsp1P58466 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdsp1P58466 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdsp1P58466 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdsp1P58466 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.46□□□□□ -0.09
Ctdsp1P58466 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdsp1P58466 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdsp1P58466 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Ctdsp1P58466 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdsp1P58466 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Ctdsp1P58466 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ctdsp1P58466 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ctdsp1P58466 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Ctdsp1P58466 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ctdsp1P58466 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ctdsp1P58466 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ctdsp1P58466 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.45□□□□□ -0.1
Ctdsp1P58466 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ctdsp1P58466 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdsp1P58466 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.44□□□□□ -0.1
Ctdsp1P58466 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.44□□□□□ -0.1
Ctdsp1P58466 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdsp1P58466 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdsp1P58466 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.43□□□□□ -0.1
Ctdsp1P58466 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdsp1P58466 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdsp1P58466 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.43□□□□□ -0.1
Ctdsp1P58466 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdsp1P58466 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ctdsp1P58466 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdsp1P58466 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdsp1P58466 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdsp1P58466 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdsp1P58466 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdsp1P58466 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ctdsp1P58466 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdsp1P58466 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdsp1P58466 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdsp1P58466 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdsp1P58466 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdsp1P58466 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdsp1P58466 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdsp1P58466 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdsp1P58466 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdsp1P58466 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdsp1P58466 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ctdsp1P58466 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdsp1P58466 Gm6311-201ENSMUST00000073790 878 ntBASIC14.42□□□□□ -0.1
Ctdsp1P58466 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms