Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.76■■□□□ 1.07
Irf5P56477 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Irf5P56477 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Irf5P56477 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
Irf5P56477 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Irf5P56477 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Irf5P56477 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.75■■□□□ 1.07
Irf5P56477 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Irf5P56477 Gm27275-201ENSMUST00000184318 272 ntBASIC21.75■■□□□ 1.07
Irf5P56477 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Irf5P56477 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.75■■□□□ 1.07
Irf5P56477 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Irf5P56477 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Irf5P56477 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.75■■□□□ 1.07
Irf5P56477 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Irf5P56477 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Irf5P56477 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Irf5P56477 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Irf5P56477 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Irf5P56477 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Irf5P56477 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Irf5P56477 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Irf5P56477 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Irf5P56477 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Irf5P56477 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Irf5P56477 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Irf5P56477 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Irf5P56477 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Irf5P56477 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Irf5P56477 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Irf5P56477 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf5P56477 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Irf5P56477 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf5P56477 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.73■■□□□ 1.07
Irf5P56477 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf5P56477 Gm5643-201ENSMUST00000117081 966 ntBASIC21.73■■□□□ 1.07
Irf5P56477 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.73■■□□□ 1.07
Irf5P56477 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf5P56477 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf5P56477 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf5P56477 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf5P56477 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.73■■□□□ 1.07
Irf5P56477 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf5P56477 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Irf5P56477 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Irf5P56477 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.72■■□□□ 1.07
Irf5P56477 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Irf5P56477 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Irf5P56477 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Irf5P56477 Gm6576-201ENSMUST00000169678 883 ntBASIC21.72■■□□□ 1.07
Irf5P56477 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.72■■□□□ 1.07
Irf5P56477 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Irf5P56477 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Irf5P56477 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Irf5P56477 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Irf5P56477 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Irf5P56477 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Irf5P56477 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf5P56477 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf5P56477 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf5P56477 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf5P56477 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Irf5P56477 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.71■■□□□ 1.07
Irf5P56477 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf5P56477 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf5P56477 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Irf5P56477 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf5P56477 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf5P56477 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.71■■□□□ 1.07
Irf5P56477 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Irf5P56477 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf5P56477 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Irf5P56477 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Irf5P56477 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Irf5P56477 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Irf5P56477 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Irf5P56477 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Irf5P56477 Gm12896-201ENSMUST00000118430 226 ntBASIC21.7■■□□□ 1.06
Irf5P56477 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.7■■□□□ 1.06
Irf5P56477 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Irf5P56477 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.7■■□□□ 1.06
Irf5P56477 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Irf5P56477 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Irf5P56477 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Irf5P56477 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Irf5P56477 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Irf5P56477 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Irf5P56477 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Irf5P56477 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Irf5P56477 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Irf5P56477 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Irf5P56477 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Irf5P56477 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Irf5P56477 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Irf5P56477 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Irf5P56477 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Irf5P56477 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Irf5P56477 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Irf5P56477 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Irf5P56477 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms