Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.99■□□□□ 0.47
Limk1P53668 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.99■□□□□ 0.47
Limk1P53668 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Limk1P53668 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Limk1P53668 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Limk1P53668 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Limk1P53668 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Limk1P53668 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.99■□□□□ 0.47
Limk1P53668 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Limk1P53668 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.98■□□□□ 0.47
Limk1P53668 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Limk1P53668 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Limk1P53668 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.98■□□□□ 0.47
Limk1P53668 Gm21814-202ENSMUST00000203277 873 ntBASIC17.98■□□□□ 0.47
Limk1P53668 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Limk1P53668 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Limk1P53668 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Limk1P53668 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Limk1P53668 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Limk1P53668 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Limk1P53668 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Limk1P53668 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Limk1P53668 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Limk1P53668 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Limk1P53668 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Limk1P53668 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Limk1P53668 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.97■□□□□ 0.47
Limk1P53668 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Limk1P53668 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.97■□□□□ 0.47
Limk1P53668 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.97■□□□□ 0.47
Limk1P53668 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Limk1P53668 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Limk1P53668 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.97■□□□□ 0.47
Limk1P53668 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Limk1P53668 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Limk1P53668 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Limk1P53668 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.97■□□□□ 0.47
Limk1P53668 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Limk1P53668 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Limk1P53668 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk1P53668 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.96■□□□□ 0.47
Limk1P53668 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk1P53668 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Limk1P53668 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.96■□□□□ 0.47
Limk1P53668 Gm30025-201ENSMUST00000218555 728 ntBASIC17.96■□□□□ 0.47
Limk1P53668 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk1P53668 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk1P53668 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk1P53668 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk1P53668 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Limk1P53668 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Limk1P53668 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
Limk1P53668 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Limk1P53668 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Limk1P53668 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Limk1P53668 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Limk1P53668 Gm10517-202ENSMUST00000192970 758 ntBASIC17.95■□□□□ 0.46
Limk1P53668 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.95■□□□□ 0.46
Limk1P53668 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Limk1P53668 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Limk1P53668 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Limk1P53668 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Limk1P53668 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Limk1P53668 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk1P53668 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.94■□□□□ 0.46
Limk1P53668 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk1P53668 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk1P53668 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Limk1P53668 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Limk1P53668 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.94■□□□□ 0.46
Limk1P53668 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk1P53668 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Limk1P53668 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk1P53668 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Limk1P53668 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk1P53668 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Limk1P53668 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk1P53668 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk1P53668 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk1P53668 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk1P53668 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Limk1P53668 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk1P53668 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk1P53668 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Limk1P53668 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Limk1P53668 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Limk1P53668 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.93■□□□□ 0.46
Limk1P53668 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk1P53668 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk1P53668 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk1P53668 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Limk1P53668 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk1P53668 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.93■□□□□ 0.46
Limk1P53668 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Limk1P53668 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Limk1P53668 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Limk1P53668 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Limk1P53668 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Limk1P53668 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Limk1P53668 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms