Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd9P40240 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd9P40240 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd9P40240 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cd9P40240 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cd9P40240 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd9P40240 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd9P40240 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd9P40240 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd9P40240 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd9P40240 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.17■□□□□ 0.5
Cd9P40240 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd9P40240 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cd9P40240 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd9P40240 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd9P40240 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd9P40240 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd9P40240 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cd9P40240 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cd9P40240 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cd9P40240 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cd9P40240 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd9P40240 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd9P40240 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Cd9P40240 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cd9P40240 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cd9P40240 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.16■□□□□ 0.5
Cd9P40240 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.16■□□□□ 0.5
Cd9P40240 Gm6365-201ENSMUST00000054711 744 ntBASIC18.16■□□□□ 0.5
Cd9P40240 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd9P40240 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd9P40240 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd9P40240 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd9P40240 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd9P40240 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.16■□□□□ 0.5
Cd9P40240 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Cd9P40240 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd9P40240 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd9P40240 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd9P40240 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd9P40240 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cd9P40240 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd9P40240 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd9P40240 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd9P40240 Gm42569-201ENSMUST00000200539 472 ntBASIC18.15■□□□□ 0.5
Cd9P40240 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cd9P40240 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.15■□□□□ 0.5
Cd9P40240 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd9P40240 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.15■□□□□ 0.5
Cd9P40240 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.15■□□□□ 0.5
Cd9P40240 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.15■□□□□ 0.5
Cd9P40240 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cd9P40240 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cd9P40240 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cd9P40240 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cd9P40240 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.14■□□□□ 0.5
Cd9P40240 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cd9P40240 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cd9P40240 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Cd9P40240 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd9P40240 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd9P40240 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.14■□□□□ 0.49
Cd9P40240 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd9P40240 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.14■□□□□ 0.49
Cd9P40240 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.14■□□□□ 0.49
Cd9P40240 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.14■□□□□ 0.49
Cd9P40240 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.14■□□□□ 0.49
Cd9P40240 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd9P40240 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd9P40240 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd9P40240 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.14■□□□□ 0.49
Cd9P40240 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd9P40240 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd9P40240 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cd9P40240 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd9P40240 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cd9P40240 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd9P40240 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd9P40240 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd9P40240 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd9P40240 Gm27405-201ENSMUST00000184201 112 ntBASIC18.13■□□□□ 0.49
Cd9P40240 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cd9P40240 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.13■□□□□ 0.49
Cd9P40240 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd9P40240 Grk6-206ENSMUST00000224995 2971 ntBASIC18.13■□□□□ 0.49
Cd9P40240 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.13■□□□□ 0.49
Cd9P40240 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd9P40240 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd9P40240 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd9P40240 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.13■□□□□ 0.49
Cd9P40240 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd9P40240 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cd9P40240 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd9P40240 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Cd9P40240 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cd9P40240 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cd9P40240 Gm6211-202ENSMUST00000167849 925 ntBASIC18.12■□□□□ 0.49
Cd9P40240 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.12■□□□□ 0.49
Cd9P40240 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.12■□□□□ 0.49
Cd9P40240 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms