Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd44P15379 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd44P15379 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd44P15379 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Cd44P15379 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.34■□□□□ 0.69
Cd44P15379 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd44P15379 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd44P15379 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cd44P15379 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd44P15379 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd44P15379 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cd44P15379 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd44P15379 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd44P15379 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cd44P15379 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.34■□□□□ 0.69
Cd44P15379 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd44P15379 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.34■□□□□ 0.69
Cd44P15379 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cd44P15379 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cd44P15379 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cd44P15379 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cd44P15379 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cd44P15379 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.33■□□□□ 0.68
Cd44P15379 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.33■□□□□ 0.68
Cd44P15379 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cd44P15379 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cd44P15379 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.33■□□□□ 0.68
Cd44P15379 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Cd44P15379 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd44P15379 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd44P15379 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd44P15379 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd44P15379 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd44P15379 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.32■□□□□ 0.68
Cd44P15379 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd44P15379 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd44P15379 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd44P15379 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd44P15379 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd44P15379 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd44P15379 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd44P15379 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.31■□□□□ 0.68
Cd44P15379 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd44P15379 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cd44P15379 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd44P15379 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd44P15379 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.31■□□□□ 0.68
Cd44P15379 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cd44P15379 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cd44P15379 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd44P15379 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd44P15379 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Cd44P15379 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.3■□□□□ 0.68
Cd44P15379 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cd44P15379 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.3■□□□□ 0.68
Cd44P15379 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd44P15379 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cd44P15379 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd44P15379 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd44P15379 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd44P15379 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cd44P15379 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd44P15379 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd44P15379 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cd44P15379 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd44P15379 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cd44P15379 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.29■□□□□ 0.68
Cd44P15379 Gm43060-201ENSMUST00000200621 289 ntBASIC19.29■□□□□ 0.68
Cd44P15379 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cd44P15379 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd44P15379 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd44P15379 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.29■□□□□ 0.68
Cd44P15379 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cd44P15379 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd44P15379 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cd44P15379 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd44P15379 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cd44P15379 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd44P15379 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.28■□□□□ 0.68
Cd44P15379 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Cd44P15379 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd44P15379 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd44P15379 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd44P15379 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cd44P15379 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cd44P15379 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.27■□□□□ 0.68
Cd44P15379 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd44P15379 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd44P15379 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd44P15379 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cd44P15379 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.27■□□□□ 0.68
Cd44P15379 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.27■□□□□ 0.68
Cd44P15379 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd44P15379 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.27■□□□□ 0.68
Cd44P15379 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cd44P15379 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cd44P15379 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cd44P15379 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cd44P15379 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cd44P15379 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms