Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RaraP11416 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RaraP11416 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RaraP11416 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.89■□□□□ 0.77
RaraP11416 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RaraP11416 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RaraP11416 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RaraP11416 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RaraP11416 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.89■□□□□ 0.77
RaraP11416 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
RaraP11416 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RaraP11416 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RaraP11416 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RaraP11416 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RaraP11416 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RaraP11416 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
RaraP11416 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RaraP11416 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.88■□□□□ 0.77
RaraP11416 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RaraP11416 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RaraP11416 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RaraP11416 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RaraP11416 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RaraP11416 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RaraP11416 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.87■□□□□ 0.77
RaraP11416 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RaraP11416 Gm13534-201ENSMUST00000121169 513 ntBASIC19.87■□□□□ 0.77
RaraP11416 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.87■□□□□ 0.77
RaraP11416 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RaraP11416 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RaraP11416 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RaraP11416 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RaraP11416 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RaraP11416 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RaraP11416 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RaraP11416 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.86■□□□□ 0.77
RaraP11416 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RaraP11416 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.86■□□□□ 0.77
RaraP11416 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RaraP11416 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RaraP11416 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RaraP11416 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RaraP11416 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RaraP11416 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RaraP11416 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RaraP11416 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RaraP11416 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RaraP11416 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RaraP11416 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RaraP11416 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RaraP11416 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
RaraP11416 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RaraP11416 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RaraP11416 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RaraP11416 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RaraP11416 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RaraP11416 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RaraP11416 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
RaraP11416 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RaraP11416 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.85■□□□□ 0.77
RaraP11416 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RaraP11416 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RaraP11416 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RaraP11416 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RaraP11416 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.84■□□□□ 0.77
RaraP11416 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
RaraP11416 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.84■□□□□ 0.77
RaraP11416 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RaraP11416 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RaraP11416 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RaraP11416 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RaraP11416 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.84■□□□□ 0.77
RaraP11416 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.84■□□□□ 0.77
RaraP11416 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RaraP11416 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RaraP11416 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RaraP11416 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RaraP11416 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.83■□□□□ 0.77
RaraP11416 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RaraP11416 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RaraP11416 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RaraP11416 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
RaraP11416 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RaraP11416 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RaraP11416 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RaraP11416 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RaraP11416 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RaraP11416 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RaraP11416 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RaraP11416 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.82■□□□□ 0.76
RaraP11416 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RaraP11416 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RaraP11416 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RaraP11416 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RaraP11416 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RaraP11416 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RaraP11416 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RaraP11416 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RaraP11416 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RaraP11416 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms