Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Polr2aP08775 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Polr2aP08775 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr2aP08775 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr2aP08775 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr2aP08775 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Polr2aP08775 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr2aP08775 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.18■□□□□ 0.98
Polr2aP08775 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr2aP08775 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Polr2aP08775 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.18■□□□□ 0.98
Polr2aP08775 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr2aP08775 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr2aP08775 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr2aP08775 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Polr2aP08775 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Polr2aP08775 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.17■□□□□ 0.98
Polr2aP08775 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr2aP08775 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr2aP08775 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Polr2aP08775 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr2aP08775 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr2aP08775 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Polr2aP08775 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.17■□□□□ 0.98
Polr2aP08775 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr2aP08775 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr2aP08775 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Polr2aP08775 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr2aP08775 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr2aP08775 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr2aP08775 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr2aP08775 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr2aP08775 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr2aP08775 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Polr2aP08775 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr2aP08775 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr2aP08775 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.15■□□□□ 0.98
Polr2aP08775 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Polr2aP08775 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Polr2aP08775 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Polr2aP08775 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Polr2aP08775 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Polr2aP08775 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Polr2aP08775 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Polr2aP08775 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Polr2aP08775 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Polr2aP08775 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Polr2aP08775 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Polr2aP08775 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.14■□□□□ 0.98
Polr2aP08775 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.98
Polr2aP08775 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Polr2aP08775 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.14■□□□□ 0.97
Polr2aP08775 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Polr2aP08775 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Polr2aP08775 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Polr2aP08775 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Polr2aP08775 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Polr2aP08775 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Polr2aP08775 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Polr2aP08775 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Polr2aP08775 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.13■□□□□ 0.97
Polr2aP08775 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Polr2aP08775 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Polr2aP08775 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2aP08775 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2aP08775 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2aP08775 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2aP08775 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Polr2aP08775 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2aP08775 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Polr2aP08775 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2aP08775 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2aP08775 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2aP08775 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2aP08775 Gm7284-201ENSMUST00000131667 944 ntBASIC21.12■□□□□ 0.97
Polr2aP08775 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Polr2aP08775 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2aP08775 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2aP08775 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Polr2aP08775 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.12■□□□□ 0.97
Polr2aP08775 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2aP08775 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr2aP08775 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr2aP08775 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC21.11■□□□□ 0.97
Polr2aP08775 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Polr2aP08775 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr2aP08775 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr2aP08775 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr2aP08775 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Polr2aP08775 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Polr2aP08775 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr2aP08775 Gm18101-201ENSMUST00000215769 548 ntBASIC21.1■□□□□ 0.97
Polr2aP08775 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr2aP08775 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr2aP08775 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Polr2aP08775 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Polr2aP08775 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Polr2aP08775 Gm38027-201ENSMUST00000192315 235 ntBASIC21.1■□□□□ 0.97
Polr2aP08775 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Polr2aP08775 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms