Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
P06344 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.39■□□□□ 0.21
P06344 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.39■□□□□ 0.21
P06344 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
P06344 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.39■□□□□ 0.21
P06344 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.39■□□□□ 0.21
P06344 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
P06344 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P06344 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.39■□□□□ 0.21
P06344 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.39■□□□□ 0.21
P06344 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
P06344 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P06344 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.39■□□□□ 0.21
P06344 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
P06344 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
P06344 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
P06344 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P06344 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P06344 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P06344 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.38■□□□□ 0.21
P06344 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
P06344 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P06344 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.38■□□□□ 0.21
P06344 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
P06344 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
P06344 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P06344 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
P06344 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
P06344 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.38■□□□□ 0.21
P06344 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
P06344 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
P06344 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P06344 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.38■□□□□ 0.21
P06344 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P06344 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P06344 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
P06344 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
P06344 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P06344 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
P06344 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
P06344 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.37■□□□□ 0.21
P06344 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P06344 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
P06344 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P06344 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
P06344 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.37■□□□□ 0.21
P06344 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.37■□□□□ 0.21
P06344 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.37■□□□□ 0.21
P06344 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
P06344 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.37■□□□□ 0.21
P06344 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P06344 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P06344 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
P06344 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.37■□□□□ 0.21
P06344 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.37■□□□□ 0.21
P06344 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P06344 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
P06344 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.36■□□□□ 0.21
P06344 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
P06344 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P06344 Gm12527-201ENSMUST00000117967 564 ntBASIC16.36■□□□□ 0.21
P06344 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
P06344 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P06344 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
P06344 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.36■□□□□ 0.21
P06344 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.36■□□□□ 0.21
P06344 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
P06344 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
P06344 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
P06344 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P06344 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P06344 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P06344 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P06344 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P06344 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
P06344 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.35■□□□□ 0.21
P06344 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.35■□□□□ 0.21
P06344 Gm10653-202ENSMUST00000139570 835 ntBASIC16.35■□□□□ 0.21
P06344 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.35■□□□□ 0.21
P06344 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P06344 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
P06344 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
P06344 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P06344 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P06344 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
P06344 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.35■□□□□ 0.21
P06344 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P06344 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P06344 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P06344 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P06344 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
P06344 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P06344 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
P06344 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P06344 Gm20049-201ENSMUST00000219950 730 ntBASIC16.34■□□□□ 0.21
P06344 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
P06344 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
P06344 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P06344 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P06344 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms