Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CcnkO88874 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CcnkO88874 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.31■□□□□ 0.2
CcnkO88874 Gm8493-201ENSMUST00000196881 489 ntBASIC16.31■□□□□ 0.2
CcnkO88874 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.31■□□□□ 0.2
CcnkO88874 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CcnkO88874 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.31■□□□□ 0.2
CcnkO88874 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CcnkO88874 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CcnkO88874 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CcnkO88874 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CcnkO88874 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CcnkO88874 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcnkO88874 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CcnkO88874 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcnkO88874 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CcnkO88874 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcnkO88874 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcnkO88874 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcnkO88874 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcnkO88874 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CcnkO88874 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CcnkO88874 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CcnkO88874 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcnkO88874 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.29■□□□□ 0.2
CcnkO88874 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnkO88874 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.29■□□□□ 0.2
CcnkO88874 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CcnkO88874 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnkO88874 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.29■□□□□ 0.2
CcnkO88874 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnkO88874 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CcnkO88874 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnkO88874 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnkO88874 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnkO88874 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnkO88874 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnkO88874 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnkO88874 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnkO88874 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnkO88874 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnkO88874 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CcnkO88874 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CcnkO88874 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnkO88874 Smad6-203ENSMUST00000179458 273 ntBASIC16.28■□□□□ 0.2
CcnkO88874 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnkO88874 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CcnkO88874 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnkO88874 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.28■□□□□ 0.2
CcnkO88874 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnkO88874 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CcnkO88874 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnkO88874 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.28■□□□□ 0.2
CcnkO88874 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.27■□□□□ 0.2
CcnkO88874 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnkO88874 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.27■□□□□ 0.2
CcnkO88874 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnkO88874 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnkO88874 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnkO88874 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnkO88874 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnkO88874 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnkO88874 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnkO88874 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CcnkO88874 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.27■□□□□ 0.2
CcnkO88874 Gm43173-201ENSMUST00000202246 593 ntBASIC16.27■□□□□ 0.2
CcnkO88874 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.27■□□□□ 0.2
CcnkO88874 Gm6139-201ENSMUST00000079261 882 ntBASIC16.27■□□□□ 0.2
CcnkO88874 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CcnkO88874 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnkO88874 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CcnkO88874 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CcnkO88874 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CcnkO88874 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
CcnkO88874 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.26■□□□□ 0.19
CcnkO88874 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcnkO88874 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CcnkO88874 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcnkO88874 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.26■□□□□ 0.19
CcnkO88874 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcnkO88874 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.26■□□□□ 0.19
CcnkO88874 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcnkO88874 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcnkO88874 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CcnkO88874 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CcnkO88874 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CcnkO88874 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CcnkO88874 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.25■□□□□ 0.19
CcnkO88874 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CcnkO88874 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CcnkO88874 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CcnkO88874 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CcnkO88874 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CcnkO88874 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CcnkO88874 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CcnkO88874 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.24■□□□□ 0.19
CcnkO88874 Gm45417-201ENSMUST00000209533 758 ntBASIC16.24■□□□□ 0.19
CcnkO88874 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CcnkO88874 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.24■□□□□ 0.19
CcnkO88874 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms