Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hcn3O88705 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn3O88705 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn3O88705 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn3O88705 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn3O88705 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn3O88705 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn3O88705 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn3O88705 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Hcn3O88705 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn3O88705 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hcn3O88705 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hcn3O88705 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hcn3O88705 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hcn3O88705 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hcn3O88705 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hcn3O88705 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Hcn3O88705 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hcn3O88705 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn3O88705 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn3O88705 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn3O88705 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn3O88705 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn3O88705 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.58■□□□□ 0.4
Hcn3O88705 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn3O88705 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn3O88705 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn3O88705 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn3O88705 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn3O88705 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn3O88705 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn3O88705 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn3O88705 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Hcn3O88705 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.57■□□□□ 0.4
Hcn3O88705 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn3O88705 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn3O88705 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hcn3O88705 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Hcn3O88705 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn3O88705 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn3O88705 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn3O88705 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn3O88705 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn3O88705 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn3O88705 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn3O88705 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn3O88705 Gm45417-201ENSMUST00000209533 758 ntBASIC17.56■□□□□ 0.4
Hcn3O88705 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Hcn3O88705 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn3O88705 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn3O88705 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Hcn3O88705 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn3O88705 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn3O88705 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn3O88705 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn3O88705 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn3O88705 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn3O88705 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Hcn3O88705 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.55■□□□□ 0.4
Hcn3O88705 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn3O88705 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.55■□□□□ 0.4
Hcn3O88705 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.55■□□□□ 0.4
Hcn3O88705 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn3O88705 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn3O88705 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn3O88705 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn3O88705 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn3O88705 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Hcn3O88705 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn3O88705 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn3O88705 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn3O88705 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn3O88705 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn3O88705 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn3O88705 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.54■□□□□ 0.4
Hcn3O88705 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hcn3O88705 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.54■□□□□ 0.4
Hcn3O88705 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hcn3O88705 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn3O88705 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn3O88705 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Hcn3O88705 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn3O88705 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.54■□□□□ 0.4
Hcn3O88705 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn3O88705 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn3O88705 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn3O88705 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.54■□□□□ 0.4
Hcn3O88705 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn3O88705 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn3O88705 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn3O88705 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.53■□□□□ 0.4
Hcn3O88705 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn3O88705 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn3O88705 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn3O88705 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn3O88705 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hcn3O88705 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Hcn3O88705 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn3O88705 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn3O88705 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms