Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Slc28a2O88627 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Slc28a2O88627 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc28a2O88627 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc28a2O88627 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Slc28a2O88627 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.34■□□□□ 0.21
Slc28a2O88627 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc28a2O88627 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc28a2O88627 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.34■□□□□ 0.21
Slc28a2O88627 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc28a2O88627 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.34■□□□□ 0.21
Slc28a2O88627 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Slc28a2O88627 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc28a2O88627 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slc28a2O88627 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc28a2O88627 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc28a2O88627 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Slc28a2O88627 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.34■□□□□ 0.21
Slc28a2O88627 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slc28a2O88627 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slc28a2O88627 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Slc28a2O88627 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc28a2O88627 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc28a2O88627 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc28a2O88627 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
Slc28a2O88627 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Slc28a2O88627 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc28a2O88627 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Slc28a2O88627 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.33■□□□□ 0.2
Slc28a2O88627 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc28a2O88627 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Slc28a2O88627 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc28a2O88627 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc28a2O88627 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc28a2O88627 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc28a2O88627 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.33■□□□□ 0.2
Slc28a2O88627 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc28a2O88627 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc28a2O88627 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Slc28a2O88627 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc28a2O88627 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Slc28a2O88627 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Slc28a2O88627 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc28a2O88627 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc28a2O88627 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc28a2O88627 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.32■□□□□ 0.2
Slc28a2O88627 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Slc28a2O88627 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc28a2O88627 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc28a2O88627 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc28a2O88627 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.31■□□□□ 0.2
Slc28a2O88627 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Slc28a2O88627 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.31■□□□□ 0.2
Slc28a2O88627 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.31■□□□□ 0.2
Slc28a2O88627 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc28a2O88627 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Slc28a2O88627 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Slc28a2O88627 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc28a2O88627 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc28a2O88627 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc28a2O88627 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Slc28a2O88627 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.3■□□□□ 0.2
Slc28a2O88627 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc28a2O88627 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc28a2O88627 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc28a2O88627 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc28a2O88627 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Slc28a2O88627 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc28a2O88627 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.3■□□□□ 0.2
Slc28a2O88627 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc28a2O88627 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Slc28a2O88627 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc28a2O88627 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc28a2O88627 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc28a2O88627 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Slc28a2O88627 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc28a2O88627 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Slc28a2O88627 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.29■□□□□ 0.2
Slc28a2O88627 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Slc28a2O88627 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc28a2O88627 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Slc28a2O88627 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc28a2O88627 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc28a2O88627 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc28a2O88627 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms