Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Pdlim3O70209 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Smad6-203ENSMUST00000179458 273 ntBASIC16.68■□□□□ 0.26
Pdlim3O70209 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.68■□□□□ 0.26
Pdlim3O70209 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.68■□□□□ 0.26
Pdlim3O70209 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.68■□□□□ 0.26
Pdlim3O70209 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim3O70209 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.67■□□□□ 0.26
Pdlim3O70209 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim3O70209 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.67■□□□□ 0.26
Pdlim3O70209 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.67■□□□□ 0.26
Pdlim3O70209 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.67■□□□□ 0.26
Pdlim3O70209 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim3O70209 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim3O70209 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim3O70209 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim3O70209 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pdlim3O70209 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim3O70209 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pdlim3O70209 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim3O70209 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim3O70209 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pdlim3O70209 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim3O70209 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim3O70209 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim3O70209 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim3O70209 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim3O70209 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pdlim3O70209 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim3O70209 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim3O70209 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim3O70209 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim3O70209 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim3O70209 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim3O70209 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim3O70209 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Pdlim3O70209 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.64■□□□□ 0.26
Pdlim3O70209 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pdlim3O70209 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim3O70209 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pdlim3O70209 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.64■□□□□ 0.25
Pdlim3O70209 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim3O70209 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim3O70209 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim3O70209 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Pdlim3O70209 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim3O70209 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pdlim3O70209 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pdlim3O70209 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim3O70209 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim3O70209 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim3O70209 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim3O70209 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim3O70209 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim3O70209 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim3O70209 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim3O70209 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim3O70209 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim3O70209 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim3O70209 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.63■□□□□ 0.25
Pdlim3O70209 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.63■□□□□ 0.25
Pdlim3O70209 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim3O70209 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pdlim3O70209 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.63■□□□□ 0.25
Pdlim3O70209 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim3O70209 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim3O70209 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim3O70209 Fst-202ENSMUST00000223640 2612 ntBASIC16.63■□□□□ 0.25
Pdlim3O70209 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim3O70209 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim3O70209 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim3O70209 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim3O70209 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim3O70209 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim3O70209 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim3O70209 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim3O70209 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.62■□□□□ 0.25
Pdlim3O70209 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.62■□□□□ 0.25
Pdlim3O70209 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim3O70209 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim3O70209 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim3O70209 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim3O70209 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim3O70209 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.62■□□□□ 0.25
Pdlim3O70209 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.62■□□□□ 0.25
Pdlim3O70209 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms