Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn5O54942 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.14■□□□□ 0.65
Cldn5O54942 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn5O54942 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cldn5O54942 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn5O54942 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn5O54942 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn5O54942 Gm13168-201ENSMUST00000121771 632 ntBASIC19.13■□□□□ 0.65
Cldn5O54942 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn5O54942 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn5O54942 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn5O54942 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn5O54942 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn5O54942 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.12■□□□□ 0.65
Cldn5O54942 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn5O54942 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.12■□□□□ 0.65
Cldn5O54942 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn5O54942 Gm2399-201ENSMUST00000104944 225 ntBASIC19.12■□□□□ 0.65
Cldn5O54942 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.12■□□□□ 0.65
Cldn5O54942 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.12■□□□□ 0.65
Cldn5O54942 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.12■□□□□ 0.65
Cldn5O54942 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn5O54942 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn5O54942 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn5O54942 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn5O54942 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn5O54942 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn5O54942 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn5O54942 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn5O54942 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn5O54942 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn5O54942 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn5O54942 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn5O54942 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.11■□□□□ 0.65
Cldn5O54942 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn5O54942 Gm11249-201ENSMUST00000117071 859 ntBASIC19.11■□□□□ 0.65
Cldn5O54942 Gm22240-201ENSMUST00000175225 82 ntBASIC19.11■□□□□ 0.65
Cldn5O54942 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.11■□□□□ 0.65
Cldn5O54942 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn5O54942 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn5O54942 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn5O54942 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn5O54942 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cldn5O54942 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn5O54942 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.1■□□□□ 0.65
Cldn5O54942 Gm8520-201ENSMUST00000186517 868 ntBASIC19.1■□□□□ 0.65
Cldn5O54942 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.1■□□□□ 0.65
Cldn5O54942 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn5O54942 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn5O54942 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn5O54942 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cldn5O54942 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.09■□□□□ 0.65
Cldn5O54942 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn5O54942 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn5O54942 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn5O54942 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn5O54942 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.09■□□□□ 0.65
Cldn5O54942 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.09■□□□□ 0.65
Cldn5O54942 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.09■□□□□ 0.65
Cldn5O54942 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn5O54942 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Cldn5O54942 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn5O54942 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn5O54942 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.09■□□□□ 0.65
Cldn5O54942 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn5O54942 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.09■□□□□ 0.65
Cldn5O54942 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn5O54942 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn5O54942 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.08■□□□□ 0.65
Cldn5O54942 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cldn5O54942 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cldn5O54942 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.08■□□□□ 0.65
Cldn5O54942 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn5O54942 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn5O54942 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn5O54942 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn5O54942 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn5O54942 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn5O54942 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.07■□□□□ 0.64
Cldn5O54942 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn5O54942 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn5O54942 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn5O54942 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn5O54942 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn5O54942 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn5O54942 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn5O54942 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn5O54942 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cldn5O54942 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn5O54942 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn5O54942 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn5O54942 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn5O54942 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cldn5O54942 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn5O54942 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn5O54942 Iqck-206ENSMUST00000208658 2891 ntBASIC19.07■□□□□ 0.64
Cldn5O54942 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn5O54942 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.06■□□□□ 0.64
Cldn5O54942 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn5O54942 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms