Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clcn6O35454 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Clcn6O35454 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn6O35454 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn6O35454 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Clcn6O35454 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.39■□□□□ 0.69
Clcn6O35454 Gm43173-201ENSMUST00000202246 593 ntBASIC19.39■□□□□ 0.69
Clcn6O35454 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Clcn6O35454 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.39■□□□□ 0.69
Clcn6O35454 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Clcn6O35454 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn6O35454 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn6O35454 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn6O35454 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn6O35454 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn6O35454 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.38■□□□□ 0.69
Clcn6O35454 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.38■□□□□ 0.69
Clcn6O35454 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn6O35454 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn6O35454 Gm8493-201ENSMUST00000196881 489 ntBASIC19.38■□□□□ 0.69
Clcn6O35454 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.38■□□□□ 0.69
Clcn6O35454 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.38■□□□□ 0.69
Clcn6O35454 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn6O35454 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Clcn6O35454 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn6O35454 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn6O35454 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn6O35454 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn6O35454 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn6O35454 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn6O35454 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn6O35454 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn6O35454 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.37■□□□□ 0.69
Clcn6O35454 CT025642.1-201ENSMUST00000224734 1219 ntBASIC19.37■□□□□ 0.69
Clcn6O35454 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.37■□□□□ 0.69
Clcn6O35454 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn6O35454 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn6O35454 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Clcn6O35454 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC19.36■□□□□ 0.69
Clcn6O35454 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn6O35454 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn6O35454 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.36■□□□□ 0.69
Clcn6O35454 Gm12467-201ENSMUST00000117625 745 ntBASIC19.36■□□□□ 0.69
Clcn6O35454 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn6O35454 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn6O35454 AC102542.1-201ENSMUST00000225204 1138 ntBASIC19.36■□□□□ 0.69
Clcn6O35454 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn6O35454 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Clcn6O35454 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn6O35454 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
Clcn6O35454 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn6O35454 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn6O35454 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn6O35454 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn6O35454 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Clcn6O35454 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn6O35454 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn6O35454 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.35■□□□□ 0.69
Clcn6O35454 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn6O35454 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Clcn6O35454 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn6O35454 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn6O35454 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn6O35454 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn6O35454 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn6O35454 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn6O35454 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.35■□□□□ 0.69
Clcn6O35454 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn6O35454 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn6O35454 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.35■□□□□ 0.69
Clcn6O35454 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Clcn6O35454 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn6O35454 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Clcn6O35454 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn6O35454 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Clcn6O35454 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Clcn6O35454 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn6O35454 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn6O35454 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.34■□□□□ 0.69
Clcn6O35454 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Clcn6O35454 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn6O35454 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC19.34■□□□□ 0.69
Clcn6O35454 AC139323.1-201ENSMUST00000223370 1040 ntBASIC19.34■□□□□ 0.69
Clcn6O35454 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn6O35454 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Clcn6O35454 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.34■□□□□ 0.69
Clcn6O35454 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn6O35454 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn6O35454 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn6O35454 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn6O35454 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn6O35454 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn6O35454 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn6O35454 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn6O35454 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn6O35454 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn6O35454 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn6O35454 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.33■□□□□ 0.69
Clcn6O35454 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn6O35454 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms