Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf11O35235 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf11O35235 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf11O35235 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tnfsf11O35235 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf11O35235 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf11O35235 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.34□□□□□ -0.11
Tnfsf11O35235 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.34□□□□□ -0.11
Tnfsf11O35235 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf11O35235 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.34□□□□□ -0.11
Tnfsf11O35235 Gm22238-201ENSMUST00000175222 88 ntBASIC14.34□□□□□ -0.11
Tnfsf11O35235 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf11O35235 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf11O35235 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf11O35235 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tnfsf11O35235 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf11O35235 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf11O35235 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Tnfsf11O35235 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfsf11O35235 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfsf11O35235 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfsf11O35235 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfsf11O35235 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf11O35235 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf11O35235 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.33□□□□□ -0.12
Tnfsf11O35235 Gm9959-201ENSMUST00000068277 390 ntBASIC14.33□□□□□ -0.12
Tnfsf11O35235 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf11O35235 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf11O35235 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf11O35235 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf11O35235 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf11O35235 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf11O35235 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf11O35235 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf11O35235 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf11O35235 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf11O35235 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf11O35235 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf11O35235 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf11O35235 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf11O35235 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.31□□□□□ -0.12
Tnfsf11O35235 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf11O35235 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tnfsf11O35235 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf11O35235 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf11O35235 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf11O35235 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms