Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.04■□□□□ 0.64
Ebf3O08791 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ebf3O08791 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf3O08791 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf3O08791 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf3O08791 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf3O08791 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf3O08791 Gm11249-201ENSMUST00000117071 859 ntBASIC19.03■□□□□ 0.64
Ebf3O08791 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.03■□□□□ 0.64
Ebf3O08791 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf3O08791 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf3O08791 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf3O08791 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf3O08791 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf3O08791 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ebf3O08791 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf3O08791 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf3O08791 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf3O08791 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf3O08791 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf3O08791 Gm6576-201ENSMUST00000169678 883 ntBASIC19.02■□□□□ 0.64
Ebf3O08791 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.02■□□□□ 0.64
Ebf3O08791 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf3O08791 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf3O08791 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf3O08791 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf3O08791 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf3O08791 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Ebf3O08791 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ebf3O08791 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ebf3O08791 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf3O08791 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf3O08791 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ebf3O08791 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ebf3O08791 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf3O08791 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ebf3O08791 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.01■□□□□ 0.63
Ebf3O08791 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.01■□□□□ 0.63
Ebf3O08791 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.01■□□□□ 0.63
Ebf3O08791 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Ebf3O08791 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf3O08791 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf3O08791 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf3O08791 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf3O08791 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf3O08791 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf3O08791 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ebf3O08791 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf3O08791 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf3O08791 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf3O08791 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf3O08791 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf3O08791 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf3O08791 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ebf3O08791 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf3O08791 Gm2399-201ENSMUST00000104944 225 ntBASIC19■□□□□ 0.63
Ebf3O08791 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf3O08791 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19■□□□□ 0.63
Ebf3O08791 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ebf3O08791 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf3O08791 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf3O08791 Gm21596-201ENSMUST00000178049 1316 ntBASIC19■□□□□ 0.63
Ebf3O08791 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf3O08791 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf3O08791 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Ebf3O08791 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.99■□□□□ 0.63
Ebf3O08791 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.99■□□□□ 0.63
Ebf3O08791 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf3O08791 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf3O08791 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.99■□□□□ 0.63
Ebf3O08791 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.99■□□□□ 0.63
Ebf3O08791 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf3O08791 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf3O08791 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf3O08791 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf3O08791 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf3O08791 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf3O08791 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf3O08791 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf3O08791 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf3O08791 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf3O08791 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.98■□□□□ 0.63
Ebf3O08791 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf3O08791 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf3O08791 Gm22325-201ENSMUST00000158904 308 ntBASIC18.98■□□□□ 0.63
Ebf3O08791 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf3O08791 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ebf3O08791 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Ebf3O08791 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf3O08791 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf3O08791 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.97■□□□□ 0.63
Ebf3O08791 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf3O08791 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.97■□□□□ 0.63
Ebf3O08791 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf3O08791 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Ebf3O08791 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.97■□□□□ 0.63
Ebf3O08791 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.97■□□□□ 0.63
Ebf3O08791 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.97■□□□□ 0.63
Ebf3O08791 Gm18666-201ENSMUST00000190039 958 ntBASIC18.97■□□□□ 0.63
Ebf3O08791 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms