Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Colca2F8VPY8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Colca2F8VPY8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.57■□□□□ 0.4
Colca2F8VPY8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.57■□□□□ 0.4
Colca2F8VPY8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Colca2F8VPY8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Colca2F8VPY8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Colca2F8VPY8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Colca2F8VPY8 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.57■□□□□ 0.4
Colca2F8VPY8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Colca2F8VPY8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Colca2F8VPY8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Colca2F8VPY8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Colca2F8VPY8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Colca2F8VPY8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Colca2F8VPY8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Colca2F8VPY8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Colca2F8VPY8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Colca2F8VPY8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.56■□□□□ 0.4
Colca2F8VPY8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Colca2F8VPY8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Colca2F8VPY8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Colca2F8VPY8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.56■□□□□ 0.4
Colca2F8VPY8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.56■□□□□ 0.4
Colca2F8VPY8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Colca2F8VPY8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Colca2F8VPY8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Colca2F8VPY8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Colca2F8VPY8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Colca2F8VPY8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Colca2F8VPY8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Colca2F8VPY8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Colca2F8VPY8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Colca2F8VPY8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Colca2F8VPY8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Colca2F8VPY8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Colca2F8VPY8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Colca2F8VPY8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Colca2F8VPY8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.54■□□□□ 0.4
Colca2F8VPY8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
Colca2F8VPY8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.54■□□□□ 0.4
Colca2F8VPY8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Colca2F8VPY8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Colca2F8VPY8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Colca2F8VPY8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.54■□□□□ 0.4
Colca2F8VPY8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Colca2F8VPY8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Colca2F8VPY8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Colca2F8VPY8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Colca2F8VPY8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.53■□□□□ 0.4
Colca2F8VPY8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Colca2F8VPY8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Colca2F8VPY8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Colca2F8VPY8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Colca2F8VPY8 Mir5130-201ENSMUST00000175160 84 ntBASIC17.53■□□□□ 0.4
Colca2F8VPY8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Colca2F8VPY8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.53■□□□□ 0.4
Colca2F8VPY8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Colca2F8VPY8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.53■□□□□ 0.4
Colca2F8VPY8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Colca2F8VPY8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Colca2F8VPY8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Colca2F8VPY8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Colca2F8VPY8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Colca2F8VPY8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Colca2F8VPY8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Colca2F8VPY8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Colca2F8VPY8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Colca2F8VPY8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Colca2F8VPY8 Gm9103-201ENSMUST00000119371 405 ntBASIC17.52■□□□□ 0.4
Colca2F8VPY8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Colca2F8VPY8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Colca2F8VPY8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Colca2F8VPY8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Colca2F8VPY8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Colca2F8VPY8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Colca2F8VPY8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Colca2F8VPY8 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.51■□□□□ 0.39
Colca2F8VPY8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Colca2F8VPY8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Colca2F8VPY8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Colca2F8VPY8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.51■□□□□ 0.39
Colca2F8VPY8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Colca2F8VPY8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Colca2F8VPY8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Colca2F8VPY8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.51■□□□□ 0.39
Colca2F8VPY8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.51■□□□□ 0.39
Colca2F8VPY8 Gm2274-201ENSMUST00000184539 609 ntBASIC17.51■□□□□ 0.39
Colca2F8VPY8 Ank2-226ENSMUST00000189368 339 ntBASIC17.51■□□□□ 0.39
Colca2F8VPY8 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.51■□□□□ 0.39
Colca2F8VPY8 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.51■□□□□ 0.39
Colca2F8VPY8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Colca2F8VPY8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Colca2F8VPY8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Colca2F8VPY8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Colca2F8VPY8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Colca2F8VPY8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Colca2F8VPY8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Colca2F8VPY8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Colca2F8VPY8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms