Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC26.07■■□□□ 1.76
Hfm1D3Z4R1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Hfm1D3Z4R1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Hfm1D3Z4R1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Hfm1D3Z4R1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Hfm1D3Z4R1 Mir2861-201ENSMUST00000175539 82 ntBASIC26.06■■□□□ 1.76
Hfm1D3Z4R1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC26.06■■□□□ 1.76
Hfm1D3Z4R1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Hfm1D3Z4R1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Hfm1D3Z4R1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Hfm1D3Z4R1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Hfm1D3Z4R1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Hfm1D3Z4R1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Hfm1D3Z4R1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Hfm1D3Z4R1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Hfm1D3Z4R1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Hfm1D3Z4R1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Hfm1D3Z4R1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Hfm1D3Z4R1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Hfm1D3Z4R1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Hfm1D3Z4R1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Hfm1D3Z4R1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Hfm1D3Z4R1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Hfm1D3Z4R1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC26.05■■□□□ 1.76
Hfm1D3Z4R1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Hfm1D3Z4R1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Hfm1D3Z4R1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Hfm1D3Z4R1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Hfm1D3Z4R1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Hfm1D3Z4R1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
Hfm1D3Z4R1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC26.04■■□□□ 1.76
Hfm1D3Z4R1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Hfm1D3Z4R1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Hfm1D3Z4R1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Hfm1D3Z4R1 Gm37805-201ENSMUST00000192612 1094 ntBASIC26.04■■□□□ 1.76
Hfm1D3Z4R1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Hfm1D3Z4R1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Hfm1D3Z4R1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Hfm1D3Z4R1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Hfm1D3Z4R1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Hfm1D3Z4R1 Gm44544-201ENSMUST00000207052 1844 ntBASIC26.03■■□□□ 1.76
Hfm1D3Z4R1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Hfm1D3Z4R1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC26.03■■□□□ 1.76
Hfm1D3Z4R1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC26.02■■□□□ 1.76
Hfm1D3Z4R1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Hfm1D3Z4R1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Hfm1D3Z4R1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC26.02■■□□□ 1.76
Hfm1D3Z4R1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Hfm1D3Z4R1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Hfm1D3Z4R1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Hfm1D3Z4R1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Hfm1D3Z4R1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Hfm1D3Z4R1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Hfm1D3Z4R1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Hfm1D3Z4R1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Hfm1D3Z4R1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Hfm1D3Z4R1 Gm27463-201ENSMUST00000183569 57 ntBASIC26.01■■□□□ 1.75
Hfm1D3Z4R1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Hfm1D3Z4R1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Hfm1D3Z4R1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC26■■□□□ 1.75
Hfm1D3Z4R1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC26■■□□□ 1.75
Hfm1D3Z4R1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC26■■□□□ 1.75
Hfm1D3Z4R1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC26■■□□□ 1.75
Hfm1D3Z4R1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Hfm1D3Z4R1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Hfm1D3Z4R1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Hfm1D3Z4R1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Hfm1D3Z4R1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC25.99■■□□□ 1.75
Hfm1D3Z4R1 Ank2-226ENSMUST00000189368 339 ntBASIC25.99■■□□□ 1.75
Hfm1D3Z4R1 AC134329.2-201ENSMUST00000217897 428 ntBASIC25.99■■□□□ 1.75
Hfm1D3Z4R1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Hfm1D3Z4R1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
Hfm1D3Z4R1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
Hfm1D3Z4R1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Hfm1D3Z4R1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Hfm1D3Z4R1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Hfm1D3Z4R1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Hfm1D3Z4R1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Hfm1D3Z4R1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Hfm1D3Z4R1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Hfm1D3Z4R1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Hfm1D3Z4R1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
Hfm1D3Z4R1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC25.97■■□□□ 1.75
Hfm1D3Z4R1 AC124603.1-201ENSMUST00000223843 308 ntBASIC25.97■■□□□ 1.75
Hfm1D3Z4R1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Hfm1D3Z4R1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC25.97■■□□□ 1.75
Hfm1D3Z4R1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Hfm1D3Z4R1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Hfm1D3Z4R1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
Hfm1D3Z4R1 Gm9103-201ENSMUST00000119371 405 ntBASIC25.97■■□□□ 1.75
Hfm1D3Z4R1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC25.97■■□□□ 1.75
Hfm1D3Z4R1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC25.97■■□□□ 1.75
Hfm1D3Z4R1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC25.96■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms