Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Gm28729A0A1B0GSW2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm28729A0A1B0GSW2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm28729A0A1B0GSW2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm28729A0A1B0GSW2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm28729A0A1B0GSW2 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.02■□□□□ 0.48
Gm28729A0A1B0GSW2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.02■□□□□ 0.48
Gm28729A0A1B0GSW2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm28729A0A1B0GSW2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Gm28729A0A1B0GSW2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Mir5122-201ENSMUST00000175004 89 ntBASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28729A0A1B0GSW2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Gm43183-201ENSMUST00000200632 547 ntBASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28729A0A1B0GSW2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28729A0A1B0GSW2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.99■□□□□ 0.47
Gm28729A0A1B0GSW2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28729A0A1B0GSW2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28729A0A1B0GSW2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28729A0A1B0GSW2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28729A0A1B0GSW2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28729A0A1B0GSW2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28729A0A1B0GSW2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Gm28729A0A1B0GSW2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28729A0A1B0GSW2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28729A0A1B0GSW2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28729A0A1B0GSW2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Gm28729A0A1B0GSW2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28729A0A1B0GSW2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28729A0A1B0GSW2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28729A0A1B0GSW2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Gm42545-201ENSMUST00000202755 922 ntBASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28729A0A1B0GSW2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Gm28729A0A1B0GSW2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.96■□□□□ 0.47
Gm28729A0A1B0GSW2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.96■□□□□ 0.47
Gm28729A0A1B0GSW2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.96■□□□□ 0.47
Gm28729A0A1B0GSW2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms