Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Gm27275-201ENSMUST00000184318 272 ntBASIC17.8■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Trmt13-210ENSMUST00000198454 880 ntBASIC17.8■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.8■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.79■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.79■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Dio3-201ENSMUST00000097228 1449 ntBASIC17.79■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Gm2399-201ENSMUST00000104944 225 ntBASIC17.78■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.78■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.78■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.77■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.77■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.77■□□□□ 0.44
Tcrg-V3A0A0G2JEW2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.74■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.74■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.73■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.73■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tcrg-V3A0A0G2JEW2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms