Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.28■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-1A0A0B4J1H0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-1A0A0B4J1H0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Gm44549-201ENSMUST00000208351 577 ntBASIC16.27■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-1A0A0B4J1H0 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.27■□□□□ 0.2
Trbv12-1A0A0B4J1H0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-1A0A0B4J1H0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-1A0A0B4J1H0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.27■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.26■□□□□ 0.19
Trbv12-1A0A0B4J1H0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.26■□□□□ 0.19
Trbv12-1A0A0B4J1H0 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.26■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv12-1A0A0B4J1H0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.26■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.23■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.23■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv12-1A0A0B4J1H0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms