Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav6-5A0A075B6B5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-5A0A075B6B5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.28□□□□□ -0.12
Trav6-5A0A075B6B5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-5A0A075B6B5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-5A0A075B6B5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-5A0A075B6B5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-5A0A075B6B5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-5A0A075B6B5 Gm5921-201ENSMUST00000075898 882 ntBASIC14.28□□□□□ -0.12
Trav6-5A0A075B6B5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-5A0A075B6B5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-5A0A075B6B5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav6-5A0A075B6B5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-5A0A075B6B5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-5A0A075B6B5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-5A0A075B6B5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-5A0A075B6B5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-5A0A075B6B5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-5A0A075B6B5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-5A0A075B6B5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav6-5A0A075B6B5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-5A0A075B6B5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-5A0A075B6B5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav6-5A0A075B6B5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav6-5A0A075B6B5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-5A0A075B6B5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav6-5A0A075B6B5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav6-5A0A075B6B5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-5A0A075B6B5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav6-5A0A075B6B5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-5A0A075B6B5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-5A0A075B6B5 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.27□□□□□ -0.13
Trav6-5A0A075B6B5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Trav6-5A0A075B6B5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Trav6-5A0A075B6B5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trav6-5A0A075B6B5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-5A0A075B6B5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-5A0A075B6B5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-5A0A075B6B5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-5A0A075B6B5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-5A0A075B6B5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-5A0A075B6B5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms