Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 AC102582.1-201ENSMUST00000215376 378 ntBASIC8.42□□□□□ -1.06
Ccdc47Q9D024 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC8.42□□□□□ -1.06
Ccdc47Q9D024 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Gm2840-201ENSMUST00000048361 411 ntBASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.42□□□□□ -1.06
Ccdc47Q9D024 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Gm42772-201ENSMUST00000199945 3041 ntBASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Ccdc47Q9D024 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm37906-201ENSMUST00000192050 3035 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 CT010470.1-201ENSMUST00000225364 1876 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 AC154747.4-203ENSMUST00000225893 1384 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm13414-201ENSMUST00000117516 727 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm11865-201ENSMUST00000118093 859 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm14990-201ENSMUST00000122354 445 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm2735-201ENSMUST00000136133 277 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm9697-201ENSMUST00000147052 997 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm25505-201ENSMUST00000157220 246 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm26182-201ENSMUST00000157688 116 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm28070-201ENSMUST00000191502 445 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm36928-201ENSMUST00000192466 694 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm37325-201ENSMUST00000194971 694 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm34424-201ENSMUST00000213400 782 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC8.41□□□□□ -1.06
Ccdc47Q9D024 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc47Q9D024 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm6640-201ENSMUST00000120629 1587 ntBASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm15484-201ENSMUST00000118871 828 ntBASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm14584-201ENSMUST00000118956 637 ntBASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm12601-201ENSMUST00000118994 846 ntBASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm14251-201ENSMUST00000122133 279 ntBASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm4613-201ENSMUST00000165488 276 ntBASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm21182-201ENSMUST00000178899 794 ntBASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm18699-201ENSMUST00000190713 243 ntBASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm21577-201ENSMUST00000190823 697 ntBASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm37322-201ENSMUST00000193409 337 ntBASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm43040-201ENSMUST00000202399 558 ntBASIC8.4□□□□□ -1.06
Ccdc47Q9D024 Gm43905-201ENSMUST00000204516 204 ntBASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms