Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Gm3608-201ENSMUST00000086725 2858 ntBASIC7.05□□□□□ -1.28
Msh4Q99MT2 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Msh4Q99MT2 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Msh4Q99MT2 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm6350-201ENSMUST00000195099 1339 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm10601-201ENSMUST00000120436 1422 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm37163-201ENSMUST00000195439 1690 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Mir503-201ENSMUST00000102168 71 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm14201-201ENSMUST00000117627 289 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm16044-201ENSMUST00000118475 450 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm16056-201ENSMUST00000119293 135 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm6877-201ENSMUST00000119347 1101 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm12593-201ENSMUST00000120981 743 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm15362-201ENSMUST00000121459 388 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm24011-201ENSMUST00000157732 268 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm20223-201ENSMUST00000199932 805 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm4796-201ENSMUST00000219802 624 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC7.04□□□□□ -1.28
Msh4Q99MT2 AC165260.3-201ENSMUST00000225101 665 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 AC152394.1-201ENSMUST00000227360 1086 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm44101-201ENSMUST00000203951 2221 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Msh4Q99MT2 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm28651-202ENSMUST00000227968 2693 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.04□□□□□ -1.28
Msh4Q99MT2 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC7.03□□□□□ -1.28
Msh4Q99MT2 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Msh4Q99MT2 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm11865-201ENSMUST00000118093 859 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm15778-201ENSMUST00000118469 608 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm13463-201ENSMUST00000119020 233 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm12331-201ENSMUST00000119927 622 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm15275-201ENSMUST00000154752 347 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm23639-201ENSMUST00000175078 132 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm24369-201ENSMUST00000175387 96 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm27401-201ENSMUST00000184052 173 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm38063-201ENSMUST00000193990 342 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm19080-201ENSMUST00000196082 550 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm7285-201ENSMUST00000198801 580 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm43748-201ENSMUST00000202329 1233 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm18690-201ENSMUST00000204488 985 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm31663-202ENSMUST00000208481 1190 ntBASIC7.03□□□□□ -1.28
Msh4Q99MT2 Gm18469-201ENSMUST00000208850 439 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms