Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 AC159002.2-201ENSMUST00000228843 4874 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm44863-201ENSMUST00000207613 1422 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm14904-201ENSMUST00000117067 335 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm5752-201ENSMUST00000117771 594 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm7599-201ENSMUST00000121453 796 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm12754-201ENSMUST00000121908 454 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm7244-201ENSMUST00000164658 455 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm26179-201ENSMUST00000177723 132 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm26729-201ENSMUST00000180744 352 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm35108-201ENSMUST00000194321 699 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm33191-201ENSMUST00000195604 699 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm43928-201ENSMUST00000203737 409 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm9652-201ENSMUST00000209345 163 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm5791-201ENSMUST00000220840 489 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 AC102676.1-201ENSMUST00000228131 719 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gm10623-201ENSMUST00000209081 2639 ntBASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Nup88Q8CEC0 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm11880-201ENSMUST00000117612 399 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm13183-201ENSMUST00000118615 789 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm16056-201ENSMUST00000119293 135 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm13724-201ENSMUST00000122395 1155 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm5283-201ENSMUST00000177874 334 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm27972-201ENSMUST00000184720 137 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm8524-201ENSMUST00000186232 379 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm6472-202ENSMUST00000187973 582 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm7891-201ENSMUST00000190284 843 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm6681-201ENSMUST00000205215 607 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 CT009738.1-201ENSMUST00000219031 809 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm8275-201ENSMUST00000219732 424 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 CT030705.2-201ENSMUST00000225301 556 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 AC107452.3-201ENSMUST00000228807 1308 ntBASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms