Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc87Q8CDL9 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Ccdc87Q8CDL9 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc87Q8CDL9 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.74□□□□□ -1.17
Ccdc87Q8CDL9 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc87Q8CDL9 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
Ccdc87Q8CDL9 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc87Q8CDL9 Gm37043-201ENSMUST00000194609 3105 ntBASIC7.74□□□□□ -1.17
Ccdc87Q8CDL9 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC7.74□□□□□ -1.17
Ccdc87Q8CDL9 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm6746-201ENSMUST00000108774 483 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm13858-201ENSMUST00000118862 671 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm12710-201ENSMUST00000119011 216 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm16056-201ENSMUST00000119293 135 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm5255-201ENSMUST00000120125 642 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm7571-201ENSMUST00000120252 927 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm11945-201ENSMUST00000120551 476 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm4781-201ENSMUST00000167995 781 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm20430-201ENSMUST00000172474 207 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Mir8099-2-201ENSMUST00000183568 127 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Mir8099-1-201ENSMUST00000184238 127 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm6610-201ENSMUST00000186324 358 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm7542-201ENSMUST00000201140 777 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm7588-201ENSMUST00000216866 571 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm18899-201ENSMUST00000217663 546 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Cthrc1-204ENSMUST00000226433 596 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 AC130673.1-201ENSMUST00000227992 435 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Snora9-201ENSMUST00000082579 133 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm26063-201ENSMUST00000083378 107 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm45887-201ENSMUST00000212672 2998 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc87Q8CDL9 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC7.72□□□□□ -1.17
Ccdc87Q8CDL9 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc87Q8CDL9 Gm6640-201ENSMUST00000120629 1587 ntBASIC7.72□□□□□ -1.17
Ccdc87Q8CDL9 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.72□□□□□ -1.17
Ccdc87Q8CDL9 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc87Q8CDL9 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc87Q8CDL9 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc87Q8CDL9 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc87Q8CDL9 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc87Q8CDL9 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc87Q8CDL9 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc87Q8CDL9 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc87Q8CDL9 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc87Q8CDL9 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Ccdc87Q8CDL9 Gm15186-201ENSMUST00000119345 563 ntBASIC7.72□□□□□ -1.17
Ccdc87Q8CDL9 Gm13988-201ENSMUST00000119363 288 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms