Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Gm14201-201ENSMUST00000117627 289 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Gm11810-201ENSMUST00000118311 333 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Gm16027-201ENSMUST00000161618 758 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Gm36935-201ENSMUST00000192526 292 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Gm37322-201ENSMUST00000193409 337 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Gm43590-201ENSMUST00000195987 387 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Gm30646-201ENSMUST00000207662 180 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 AC124510.2-201ENSMUST00000221958 683 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Gm11282-201ENSMUST00000119018 1416 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Gm43113-201ENSMUST00000199713 1754 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vcpip1Q8CDG3 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 AC166574.5-201ENSMUST00000227438 1432 ntBASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Mir6769b-201ENSMUST00000184793 60 ntBASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Gm7891-201ENSMUST00000190284 843 ntBASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Gm37689-201ENSMUST00000193139 275 ntBASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Gm37225-201ENSMUST00000193423 325 ntBASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Gm37102-201ENSMUST00000195740 1105 ntBASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Ighv1-73-201ENSMUST00000197435 352 ntBASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Gm5154-201ENSMUST00000203971 399 ntBASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 AC166822.1-201ENSMUST00000227667 636 ntBASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Gm10108-201ENSMUST00000078246 319 ntBASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Gm24613-201ENSMUST00000083266 130 ntBASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC7.73□□□□□ -1.17
Vcpip1Q8CDG3 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Gm14849-201ENSMUST00000122293 2846 ntBASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Gm13463-201ENSMUST00000119020 233 ntBASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Gm13545-201ENSMUST00000119044 482 ntBASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Gm15481-201ENSMUST00000120264 539 ntBASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Gm2735-201ENSMUST00000136133 277 ntBASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Gm9697-201ENSMUST00000147052 997 ntBASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Mir199b-201ENSMUST00000175066 110 ntBASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Gm23639-201ENSMUST00000175078 132 ntBASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Gm20690-201ENSMUST00000177341 315 ntBASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Gm21182-201ENSMUST00000178899 794 ntBASIC7.72□□□□□ -1.17
Vcpip1Q8CDG3 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms