Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm44356-201ENSMUST00000196731 111 ntBASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm45756-201ENSMUST00000212491 407 ntBASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm9289-201ENSMUST00000221269 606 ntBASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 AC164294.1-201ENSMUST00000224682 688 ntBASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 CT009556.3-201ENSMUST00000226173 513 ntBASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Olfr890-201ENSMUST00000079804 945 ntBASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm7265-201ENSMUST00000192735 3502 ntBASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm3608-201ENSMUST00000086725 2858 ntBASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm36930-201ENSMUST00000195431 2376 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm23529-201ENSMUST00000104562 132 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm11558-201ENSMUST00000118454 459 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm13183-201ENSMUST00000118615 789 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm14380-201ENSMUST00000122298 431 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm20797-201ENSMUST00000177894 383 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm5839-201ENSMUST00000182835 1007 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm29355-201ENSMUST00000188178 697 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm28953-201ENSMUST00000188336 697 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm29008-201ENSMUST00000189387 298 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm20788-201ENSMUST00000190538 697 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm37395-201ENSMUST00000194721 697 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm20223-201ENSMUST00000199932 805 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm19211-201ENSMUST00000200251 1206 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm34583-203ENSMUST00000202586 454 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm44192-201ENSMUST00000204195 556 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm45506-201ENSMUST00000211620 280 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm38322-201ENSMUST00000194074 2300 ntBASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Ccdc40Q8BI79 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Gm5702-201ENSMUST00000185629 2469 ntBASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 AC154270.2-201ENSMUST00000226755 2306 ntBASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Gm13854-201ENSMUST00000121183 1679 ntBASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Gm38244-201ENSMUST00000191737 2586 ntBASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Gm11688-201ENSMUST00000122145 308 ntBASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Gm15843-201ENSMUST00000146593 529 ntBASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms