Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm44156-201ENSMUST00000203885 1189 ntBASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Gm45782-201ENSMUST00000212670 366 ntBASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 AC134607.1-201ENSMUST00000214707 485 ntBASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 AC154692.1-202ENSMUST00000226632 1231 ntBASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 AC154738.3-201ENSMUST00000227953 409 ntBASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Dppa5a-201ENSMUST00000071991 619 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 n-R5s193-201ENSMUST00000082864 109 ntBASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Gm37618-201ENSMUST00000192891 3075 ntBASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Gm3883-201ENSMUST00000098119 3229 ntBASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 BC085271-201ENSMUST00000191852 1487 ntBASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Gm44652-201ENSMUST00000208648 2854 ntBASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Scaf4Q6PFF0 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm43792-201ENSMUST00000202492 2210 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm16221-201ENSMUST00000117331 393 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm15000-201ENSMUST00000118275 1243 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm13702-201ENSMUST00000118542 825 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm11389-201ENSMUST00000121407 430 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm15989-201ENSMUST00000121895 498 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm13649-201ENSMUST00000122325 606 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Bnip1-206ENSMUST00000135824 629 ntTSL 5 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm22224-201ENSMUST00000157357 93 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm4831-201ENSMUST00000174626 594 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm18416-201ENSMUST00000175635 1003 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm6799-201ENSMUST00000186919 573 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm29562-201ENSMUST00000190113 904 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm38330-201ENSMUST00000192743 959 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm44471-201ENSMUST00000197963 100 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm42464-202ENSMUST00000198111 774 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm42926-201ENSMUST00000200496 697 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm44181-201ENSMUST00000203106 483 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 AC207128.1-201ENSMUST00000225928 799 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 AC139294.2-201ENSMUST00000227159 285 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm4863-201ENSMUST00000196907 1381 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm43178-201ENSMUST00000197257 1386 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm9256-201ENSMUST00000198106 1420 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Gm37745-201ENSMUST00000193304 8163 ntBASIC7.4□□□□□ -1.22
Scaf4Q6PFF0 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Scaf4Q6PFF0 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Scaf4Q6PFF0 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Scaf4Q6PFF0 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Scaf4Q6PFF0 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Scaf4Q6PFF0 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Scaf4Q6PFF0 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms