Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Katnal1-201ENSMUST00000047257 6157 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm9030-201ENSMUST00000218405 2410 ntBASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm9029-201ENSMUST00000219232 2410 ntBASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC8.79□□□□□ -1
Shank3Q4ACU6 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Shank3Q4ACU6 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm15575-201ENSMUST00000119414 1581 ntBASIC8.79□□□□□ -1
Shank3Q4ACU6 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm13400-201ENSMUST00000117436 380 ntBASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm5319-201ENSMUST00000118965 873 ntBASIC8.79□□□□□ -1
Shank3Q4ACU6 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm23896-201ENSMUST00000158109 130 ntBASIC8.79□□□□□ -1
Shank3Q4ACU6 Cfhr3-201ENSMUST00000170441 1022 ntBASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm22917-201ENSMUST00000180116 110 ntBASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm6931-201ENSMUST00000183103 371 ntBASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm7499-201ENSMUST00000210423 813 ntBASIC8.79□□□□□ -1
Shank3Q4ACU6 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC8.79□□□□□ -1
Shank3Q4ACU6 AC138329.1-201ENSMUST00000225040 471 ntBASIC8.79□□□□□ -1
Shank3Q4ACU6 AC138765.3-201ENSMUST00000227981 423 ntBASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm10205-201ENSMUST00000087431 234 ntBASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC8.79□□□□□ -1
Shank3Q4ACU6 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Shank3Q4ACU6 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Shank3Q4ACU6 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.79□□□□□ -1
Shank3Q4ACU6 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Shank3Q4ACU6 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Shank3Q4ACU6 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Shank3Q4ACU6 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC8.79□□□□□ -1
Shank3Q4ACU6 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC8.79□□□□□ -1
Shank3Q4ACU6 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
Shank3Q4ACU6 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Shank3Q4ACU6 AC158605.4-201ENSMUST00000219013 3361 ntBASIC8.78□□□□□ -1
Shank3Q4ACU6 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.78□□□□□ -1
Shank3Q4ACU6 Gm19972-201ENSMUST00000218180 5664 ntBASIC8.78□□□□□ -1
Shank3Q4ACU6 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC8.78□□□□□ -1
Shank3Q4ACU6 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 Gm17841-201ENSMUST00000210711 2425 ntBASIC8.78□□□□□ -1
Shank3Q4ACU6 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
Shank3Q4ACU6 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC8.78□□□□□ -1
Shank3Q4ACU6 Gm12135-201ENSMUST00000119170 466 ntBASIC8.78□□□□□ -1
Shank3Q4ACU6 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC8.78□□□□□ -1
Shank3Q4ACU6 Gm45693-201ENSMUST00000211391 1157 ntBASIC8.78□□□□□ -1
Shank3Q4ACU6 Gm45899-201ENSMUST00000212196 1276 ntBASIC8.78□□□□□ -1
Shank3Q4ACU6 Gm4803-201ENSMUST00000218729 1279 ntBASIC8.78□□□□□ -1
Shank3Q4ACU6 AC147782.1-201ENSMUST00000219169 475 ntBASIC8.78□□□□□ -1
Shank3Q4ACU6 AC154806.5-204ENSMUST00000228900 867 ntBASIC8.78□□□□□ -1
Shank3Q4ACU6 n-R5s97-201ENSMUST00000082585 113 ntBASIC8.78□□□□□ -1
Shank3Q4ACU6 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 AC123738.2-201ENSMUST00000223791 1899 ntBASIC8.78□□□□□ -1
Shank3Q4ACU6 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC8.78□□□□□ -1
Shank3Q4ACU6 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Shank3Q4ACU6 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Shank3Q4ACU6 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Shank3Q4ACU6 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.78□□□□□ -1
Shank3Q4ACU6 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Shank3Q4ACU6 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
Shank3Q4ACU6 Dgkh-206ENSMUST00000228362 3308 ntBASIC8.77□□□□□ -1
Shank3Q4ACU6 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.77□□□□□ -1
Shank3Q4ACU6 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Shank3Q4ACU6 Gm5841-201ENSMUST00000195307 2177 ntBASIC8.77□□□□□ -1
Shank3Q4ACU6 Gm44950-201ENSMUST00000206403 2296 ntBASIC8.77□□□□□ -1
Shank3Q4ACU6 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC8.77□□□□□ -1
Shank3Q4ACU6 Gm11256-201ENSMUST00000118109 829 ntBASIC8.77□□□□□ -1
Shank3Q4ACU6 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.77□□□□□ -1
Shank3Q4ACU6 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC8.77□□□□□ -1
Shank3Q4ACU6 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC8.77□□□□□ -1
Shank3Q4ACU6 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC8.77□□□□□ -1
Shank3Q4ACU6 Gm15257-201ENSMUST00000177680 883 ntBASIC8.77□□□□□ -1
Shank3Q4ACU6 Gm15252-201ENSMUST00000177750 883 ntBASIC8.77□□□□□ -1
Shank3Q4ACU6 Gm15256-201ENSMUST00000177793 883 ntBASIC8.77□□□□□ -1
Shank3Q4ACU6 Gm15260-201ENSMUST00000179402 883 ntBASIC8.77□□□□□ -1
Shank3Q4ACU6 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC8.77□□□□□ -1
Shank3Q4ACU6 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.77□□□□□ -1
Shank3Q4ACU6 Gm20223-201ENSMUST00000199932 805 ntBASIC8.77□□□□□ -1
Shank3Q4ACU6 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC8.77□□□□□ -1
Shank3Q4ACU6 Gm18851-201ENSMUST00000210087 1058 ntBASIC8.77□□□□□ -1
Shank3Q4ACU6 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC8.77□□□□□ -1
Shank3Q4ACU6 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC8.77□□□□□ -1
Shank3Q4ACU6 AC161374.1-201ENSMUST00000224191 794 ntBASIC8.77□□□□□ -1
Shank3Q4ACU6 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC8.77□□□□□ -1
Shank3Q4ACU6 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.77□□□□□ -1.01
Shank3Q4ACU6 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms