Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim43aQ3TL54 Gm9800-201ENSMUST00000052615 336 ntBASIC7.59□□□□□ -1.19
Trim43aQ3TL54 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim43aQ3TL54 Mir135b-201ENSMUST00000083501 97 ntBASIC7.59□□□□□ -1.19
Trim43aQ3TL54 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC7.59□□□□□ -1.19
Trim43aQ3TL54 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim43aQ3TL54 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim43aQ3TL54 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim43aQ3TL54 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim43aQ3TL54 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim43aQ3TL54 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim43aQ3TL54 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Trim43aQ3TL54 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Gm6490-201ENSMUST00000111862 461 ntBASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Gm15158-201ENSMUST00000120577 570 ntBASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Gm22275-201ENSMUST00000122470 310 ntBASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Gm22687-201ENSMUST00000158301 105 ntBASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Gm8046-201ENSMUST00000172151 616 ntBASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Mir7029-201ENSMUST00000184777 61 ntBASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Gm29008-201ENSMUST00000189387 298 ntBASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Gm42573-201ENSMUST00000202327 478 ntBASIC7.58□□□□□ -1.2
Trim43aQ3TL54 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Gm42595-201ENSMUST00000196771 1607 ntBASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim43aQ3TL54 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Malat1-201ENSMUST00000172812 6983 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm43747-201ENSMUST00000201412 1330 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm13521-201ENSMUST00000118922 866 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm14796-201ENSMUST00000121216 959 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm12181-201ENSMUST00000121448 531 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm23657-201ENSMUST00000122623 294 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm10157-201ENSMUST00000139408 343 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm5272-201ENSMUST00000182730 982 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm42673-201ENSMUST00000202676 337 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm45497-201ENSMUST00000211701 740 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm25926-201ENSMUST00000082899 160 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm7562-201ENSMUST00000210502 2537 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms