Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm26408-201ENSMUST00000157672 127 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC8.28□□□□□ -1.08
Hmgb1P63158 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Mrgprb13-201ENSMUST00000188191 985 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm44823-201ENSMUST00000204775 1107 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm43922-201ENSMUST00000205071 328 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm8667-201ENSMUST00000211112 449 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm45887-201ENSMUST00000212672 2998 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm19885-201ENSMUST00000212853 343 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 AC164424.3-201ENSMUST00000220809 148 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 AC166358.8-201ENSMUST00000223288 105 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 AC124739.1-201ENSMUST00000223433 148 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Vmn1r41-204ENSMUST00000227039 985 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Hmgb1P63158 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Hmgb1P63158 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Hmgb1P63158 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 AC154576.1-202ENSMUST00000223966 3320 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 AC131667.1-201ENSMUST00000214665 2175 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm29438-201ENSMUST00000191298 2613 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Hmgb1P63158 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.08
Hmgb1P63158 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.08
Hmgb1P63158 Gm44229-201ENSMUST00000203211 2487 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC8.27□□□□□ -1.09
Hmgb1P63158 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm11970-201ENSMUST00000116105 320 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm26469-201ENSMUST00000116765 121 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm14509-201ENSMUST00000117312 1286 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm13552-201ENSMUST00000118837 417 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm15753-201ENSMUST00000119241 1062 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm8084-201ENSMUST00000120807 752 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm15171-201ENSMUST00000122191 334 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm25669-201ENSMUST00000157699 112 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm26355-201ENSMUST00000158220 105 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm6726-201ENSMUST00000172786 681 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm7031-201ENSMUST00000173709 919 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Mir3078-201ENSMUST00000175231 87 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm5251-201ENSMUST00000188959 472 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm37996-201ENSMUST00000191859 367 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm37469-201ENSMUST00000193728 890 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm44285-201ENSMUST00000203557 940 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm16475-202ENSMUST00000209033 528 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Hmgb1P63158 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm18914-201ENSMUST00000214625 616 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC8.27□□□□□ -1.09
Hmgb1P63158 AC154649.2-201ENSMUST00000228189 808 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm42905-201ENSMUST00000196237 1611 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC8.27□□□□□ -1.09
Hmgb1P63158 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm44228-201ENSMUST00000204888 2026 ntBASIC8.27□□□□□ -1.09
Hmgb1P63158 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 140 ms