Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rrp1P56183 Gm28341-201ENSMUST00000190883 472 ntBASIC8.03□□□□□ -1.12
Rrp1P56183 Gm37977-201ENSMUST00000193096 721 ntBASIC8.03□□□□□ -1.12
Rrp1P56183 Gm9710-201ENSMUST00000198053 499 ntBASIC8.03□□□□□ -1.12
Rrp1P56183 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rrp1P56183 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rrp1P56183 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.03□□□□□ -1.12
Rrp1P56183 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rrp1P56183 Gm24046-201ENSMUST00000083111 165 ntBASIC8.03□□□□□ -1.12
Rrp1P56183 Gm24613-201ENSMUST00000083266 130 ntBASIC8.03□□□□□ -1.12
Rrp1P56183 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rrp1P56183 Gm17199-201ENSMUST00000097296 416 ntBASIC8.03□□□□□ -1.12
Rrp1P56183 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
Rrp1P56183 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rrp1P56183 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.03□□□□□ -1.12
Rrp1P56183 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rrp1P56183 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rrp1P56183 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rrp1P56183 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Rrp1P56183 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rrp1P56183 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rrp1P56183 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Rrp1P56183 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rrp1P56183 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Rrp1P56183 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rrp1P56183 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rrp1P56183 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC8.03□□□□□ -1.12
Rrp1P56183 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
Rrp1P56183 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rrp1P56183 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rrp1P56183 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC8.02□□□□□ -1.13
Rrp1P56183 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rrp1P56183 Gm20121-201ENSMUST00000198547 1594 ntBASIC8.02□□□□□ -1.13
Rrp1P56183 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
Rrp1P56183 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8.02□□□□□ -1.13
Rrp1P56183 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.02□□□□□ -1.13
Rrp1P56183 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC8.02□□□□□ -1.13
Rrp1P56183 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rrp1P56183 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rrp1P56183 Gm25276-201ENSMUST00000104300 124 ntBASIC8.02□□□□□ -1.13
Rrp1P56183 Gm13940-201ENSMUST00000121023 301 ntBASIC8.02□□□□□ -1.13
Rrp1P56183 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rrp1P56183 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.02□□□□□ -1.13
Rrp1P56183 Gm25277-201ENSMUST00000157266 324 ntBASIC8.02□□□□□ -1.13
Rrp1P56183 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rrp1P56183 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rrp1P56183 Gm8192-201ENSMUST00000182196 958 ntBASIC8.02□□□□□ -1.13
Rrp1P56183 Gm21430-201ENSMUST00000182998 998 ntBASIC8.02□□□□□ -1.13
Rrp1P56183 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC8.02□□□□□ -1.13
Rrp1P56183 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rrp1P56183 Gm6197-201ENSMUST00000192273 454 ntBASIC8.02□□□□□ -1.13
Rrp1P56183 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC8.02□□□□□ -1.13
Rrp1P56183 Gm43558-201ENSMUST00000200155 210 ntBASIC8.02□□□□□ -1.13
Rrp1P56183 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rrp1P56183 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rrp1P56183 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rrp1P56183 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.02□□□□□ -1.13
Rrp1P56183 AV026068-219ENSMUST00000224148 933 ntBASIC8.02□□□□□ -1.13
Rrp1P56183 Gm25852-201ENSMUST00000082790 130 ntBASIC8.02□□□□□ -1.13
Rrp1P56183 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rrp1P56183 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rrp1P56183 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rrp1P56183 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rrp1P56183 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC8.02□□□□□ -1.13
Rrp1P56183 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
Rrp1P56183 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rrp1P56183 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Rrp1P56183 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rrp1P56183 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Rrp1P56183 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Rrp1P56183 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC8.01□□□□□ -1.13
Rrp1P56183 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rrp1P56183 Gm42996-201ENSMUST00000196116 1636 ntBASIC8.01□□□□□ -1.13
Rrp1P56183 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rrp1P56183 Gm11855-201ENSMUST00000121562 1869 ntBASIC8.01□□□□□ -1.13
Rrp1P56183 Gm14158-201ENSMUST00000118409 308 ntBASIC8.01□□□□□ -1.13
Rrp1P56183 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rrp1P56183 Gm26323-201ENSMUST00000157743 175 ntBASIC8.01□□□□□ -1.13
Rrp1P56183 Gm24130-201ENSMUST00000158536 151 ntBASIC8.01□□□□□ -1.13
Rrp1P56183 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC8.01□□□□□ -1.13
Rrp1P56183 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC8.01□□□□□ -1.13
Rrp1P56183 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC8.01□□□□□ -1.13
Rrp1P56183 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rrp1P56183 Gm37724-201ENSMUST00000195240 1221 ntBASIC8.01□□□□□ -1.13
Rrp1P56183 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rrp1P56183 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rrp1P56183 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Rrp1P56183 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.01□□□□□ -1.13
Rrp1P56183 AC163660.1-201ENSMUST00000223696 818 ntBASIC8.01□□□□□ -1.13
Rrp1P56183 CT010472.1-201ENSMUST00000224000 704 ntBASIC8.01□□□□□ -1.13
Rrp1P56183 CT009556.4-201ENSMUST00000227092 200 ntBASIC8.01□□□□□ -1.13
Rrp1P56183 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rrp1P56183 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Rrp1P56183 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rrp1P56183 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rrp1P56183 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rrp1P56183 Gm5512-202ENSMUST00000220222 1522 ntBASIC8.01□□□□□ -1.13
Rrp1P56183 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rrp1P56183 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rrp1P56183 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms