Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm44988-201ENSMUST00000203835 1161 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC9.02□□□□□ -0.97
Rfx1P48377 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Gm45475-201ENSMUST00000209381 309 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Gm7688-201ENSMUST00000212857 337 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 AC142407.1-201ENSMUST00000214371 494 ntTSL 5 BASIC9.02□□□□□ -0.97
Rfx1P48377 AL929285.1-201ENSMUST00000215522 229 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Gm19161-201ENSMUST00000217958 737 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Gm35412-201ENSMUST00000220437 999 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 AC132833.4-201ENSMUST00000228313 203 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Olfr1153-201ENSMUST00000052300 957 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Rfx1P48377 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Rfx1P48377 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Gm45221-201ENSMUST00000207822 2272 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Gm45407-201ENSMUST00000209499 3676 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Rfx1P48377 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Rfx1P48377 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rfx1P48377 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rfx1P48377 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC9.01□□□□□ -0.97
Rfx1P48377 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Rfx1P48377 Gm17083-201ENSMUST00000165849 1366 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Gm7842-201ENSMUST00000217691 1379 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Gm44797-201ENSMUST00000208780 1837 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rfx1P48377 Gm37510-201ENSMUST00000194151 4762 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Gm30698-201ENSMUST00000214789 3198 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rfx1P48377 Gm14056-201ENSMUST00000117198 642 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC9.01□□□□□ -0.97
Rfx1P48377 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC9.01□□□□□ -0.97
Rfx1P48377 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Gm27864-201ENSMUST00000183704 190 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rfx1P48377 Gm37934-201ENSMUST00000192902 402 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Gm37187-201ENSMUST00000193425 341 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC9.01□□□□□ -0.97
Rfx1P48377 Gm42861-201ENSMUST00000199596 634 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC9.01□□□□□ -0.97
Rfx1P48377 Gm7554-201ENSMUST00000202282 574 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC9.01□□□□□ -0.97
Rfx1P48377 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC9.01□□□□□ -0.97
Rfx1P48377 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC9.01□□□□□ -0.97
Rfx1P48377 Gm45889-201ENSMUST00000209535 1057 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Gm32842-201ENSMUST00000212653 738 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC9.01□□□□□ -0.97
Rfx1P48377 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC9.01□□□□□ -0.97
Rfx1P48377 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Rfx1P48377 Gm7086-202ENSMUST00000228849 506 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rfx1P48377 Olfr1280-201ENSMUST00000082167 1003 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Rfx1P48377 Gm25259-201ENSMUST00000083048 193 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rfx1P48377 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rfx1P48377 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC9.01□□□□□ -0.97
Rfx1P48377 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Rfx1P48377 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Rfx1P48377 Gm10623-201ENSMUST00000209081 2639 ntBASIC9.01□□□□□ -0.97
Rfx1P48377 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Rfx1P48377 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC9□□□□□ -0.97
Rfx1P48377 Gm8569-201ENSMUST00000117630 647 ntBASIC9□□□□□ -0.97
Rfx1P48377 Gm13254-201ENSMUST00000118295 654 ntBASIC9□□□□□ -0.97
Rfx1P48377 Gm12844-201ENSMUST00000119463 582 ntBASIC9□□□□□ -0.97
Rfx1P48377 Gm12587-201ENSMUST00000120180 427 ntBASIC9□□□□□ -0.97
Rfx1P48377 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Rfx1P48377 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC9□□□□□ -0.97
Rfx1P48377 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Gm25557-201ENSMUST00000158084 315 ntBASIC9□□□□□ -0.97
Rfx1P48377 Gm24347-201ENSMUST00000158711 142 ntBASIC9□□□□□ -0.97
Rfx1P48377 V1rg10-201ENSMUST00000183378 937 ntBASIC9□□□□□ -0.97
Rfx1P48377 Gm27762-201ENSMUST00000183417 109 ntBASIC9□□□□□ -0.97
Rfx1P48377 Mir6403-201ENSMUST00000185007 129 ntBASIC9□□□□□ -0.97
Rfx1P48377 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms