Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm20702-201ENSMUST00000176181 460 ntBASIC6.73□□□□□ -1.33
Sox6P40645 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Sox6P40645 Gm28164-201ENSMUST00000190143 442 ntBASIC6.73□□□□□ -1.33
Sox6P40645 Gm21577-201ENSMUST00000190823 697 ntBASIC6.73□□□□□ -1.33
Sox6P40645 Gm5575-201ENSMUST00000190879 398 ntBASIC6.73□□□□□ -1.33
Sox6P40645 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Sox6P40645 Gm5586-201ENSMUST00000206264 795 ntBASIC6.73□□□□□ -1.33
Sox6P40645 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox6P40645 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox6P40645 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox6P40645 Gm45925-202ENSMUST00000219904 1136 ntBASIC6.73□□□□□ -1.33
Sox6P40645 AC154382.1-201ENSMUST00000220958 1282 ntBASIC6.73□□□□□ -1.33
Sox6P40645 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox6P40645 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sox6P40645 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.73□□□□□ -1.33
Sox6P40645 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
Sox6P40645 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Sox6P40645 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Sox6P40645 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Sox6P40645 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Sox6P40645 Gm18957-201ENSMUST00000197623 1813 ntBASIC6.73□□□□□ -1.33
Sox6P40645 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Sox6P40645 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
Sox6P40645 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.73□□□□□ -1.33
Sox6P40645 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sox6P40645 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.73□□□□□ -1.33
Sox6P40645 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.73□□□□□ -1.33
Sox6P40645 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.72□□□□□ -1.33
Sox6P40645 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sox6P40645 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.72□□□□□ -1.33
Sox6P40645 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.72□□□□□ -1.33
Sox6P40645 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.72□□□□□ -1.33
Sox6P40645 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 Gm16221-201ENSMUST00000117331 393 ntBASIC6.72□□□□□ -1.33
Sox6P40645 Gm13163-201ENSMUST00000119875 336 ntBASIC6.72□□□□□ -1.33
Sox6P40645 Gm15160-201ENSMUST00000120553 907 ntBASIC6.72□□□□□ -1.33
Sox6P40645 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.72□□□□□ -1.33
Sox6P40645 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC6.72□□□□□ -1.33
Sox6P40645 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC6.72□□□□□ -1.33
Sox6P40645 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.72□□□□□ -1.33
Sox6P40645 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 Gm29008-201ENSMUST00000189387 298 ntBASIC6.72□□□□□ -1.33
Sox6P40645 Gm37977-201ENSMUST00000193096 721 ntBASIC6.72□□□□□ -1.33
Sox6P40645 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC6.72□□□□□ -1.33
Sox6P40645 Gm44356-201ENSMUST00000196731 111 ntBASIC6.72□□□□□ -1.33
Sox6P40645 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox6P40645 Gm18484-201ENSMUST00000204389 991 ntBASIC6.72□□□□□ -1.33
Sox6P40645 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 Gm45506-201ENSMUST00000211620 280 ntBASIC6.72□□□□□ -1.33
Sox6P40645 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.72□□□□□ -1.33
Sox6P40645 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sox6P40645 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox6P40645 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox6P40645 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.72□□□□□ -1.33
Sox6P40645 AC164424.3-201ENSMUST00000220809 148 ntBASIC6.72□□□□□ -1.33
Sox6P40645 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.72□□□□□ -1.33
Sox6P40645 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox6P40645 AC166358.8-201ENSMUST00000223288 105 ntBASIC6.72□□□□□ -1.33
Sox6P40645 AC124739.1-201ENSMUST00000223433 148 ntBASIC6.72□□□□□ -1.33
Sox6P40645 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 AC163038.4-201ENSMUST00000224942 474 ntBASIC6.72□□□□□ -1.33
Sox6P40645 AC125539.1-201ENSMUST00000227423 622 ntBASIC6.72□□□□□ -1.33
Sox6P40645 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC6.72□□□□□ -1.33
Sox6P40645 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 Snora9-201ENSMUST00000082579 133 ntBASIC6.72□□□□□ -1.33
Sox6P40645 Gm2654-201ENSMUST00000221381 1592 ntBASIC6.72□□□□□ -1.33
Sox6P40645 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox6P40645 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox6P40645 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox6P40645 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Sox6P40645 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sox6P40645 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Sox6P40645 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Sox6P40645 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sox6P40645 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.33
Sox6P40645 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.71□□□□□ -1.33
Sox6P40645 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
Sox6P40645 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Sox6P40645 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.71□□□□□ -1.33
Sox6P40645 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox6P40645 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sox6P40645 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms